RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 PPM1AP35813 382 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 CETN2P41208 172 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 SLC1A1P43005 524 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 STAT2P52630 851 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 GALCP54803 685 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 SLC12A3P55017 1021 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 MRPS25P82663 173 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 SF3A3Q12874 501 aaKnown RBP eCLIP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 PTP4A2Q12974 167 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 DYNC1I2Q13409 638 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 PRKG1Q13976 671 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 GSTA3Q16772 222 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 ARL13AQ5H913 290 aaPredicted RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 AP1ARQ63HQ0 302 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 Q6ZTK2 550 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 SPATA21Q7Z572 469 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 CUZD1Q86UP6 607 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 TDRPQ86YL5 185 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 APOBEC3FQ8IUX4 373 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 MFN1Q8IWA4 741 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 ARHGAP24Q8N264 748 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 ENDOVQ8N8Q3 282 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 GABPB2Q8TAK5 448 aaPredicted RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 LMO3Q8TAP4 145 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 CLEC4CQ8WTT0 213 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 CHURC1Q8WUH1 139 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 SCFD1Q8WVM8 642 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 CKAP2Q8WWK9 683 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 SPDL1Q96EA4 605 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 TMEM41AQ96HV5 264 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 TRAPPC9Q96Q05 1148 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 IWS1Q96ST2 819 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 PSMB7Q99436 277 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 PLIN2Q99541 437 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 TIPINQ9BVW5 301 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 TMEM120AQ9BXJ8 343 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 SEZ6LQ9BYH1 1024 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 DDX47Q9H0S4 455 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 LRMDAQ9H2I8 198 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 ECT2Q9H8V3 914 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 PNRC2Q9NPJ4 139 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 RNF146Q9NTX7 359 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 NKIRAS1Q9NYS0 192 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 GGA3Q9NZ52 723 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 CPSF2Q9P2I0 782 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 DNAJB4Q9UDY4 337 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 CNOT8Q9UFF9 292 aaKnown RBP4.61□□□□□ -1.67
LMBR1-216ENST00000477983 LNPEPQ9UIQ6 1025 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 DTX4Q9Y2E6 619 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 RABGAP1Q9Y3P9 1069 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 USH1CQ9Y6N9 552 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 FRMPD4Q14CM0 1322 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 ADGRA3Q8IWK6 1321 aa4.61□□□□□ -1.67
LMBR1-216ENST00000477983 ZSCAN5CA6NGD5 496 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SLC38A8A6NNN8 435 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 A8MXQ7 604 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 PDLIM1O00151 329 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 IPO5O00410 1097 aaKnown RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 MEIS2O14770 477 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ATP2A1O14983 1001 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 RGS14O43566 566 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ASNA1O43681 348 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SLC37A4O43826 429 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ZBED4O75132 1171 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 TBCAO75347 108 aaKnown RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 PAPSS2O95340 614 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 TTC4O95801 387 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 NR3C1P04150 777 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 MYBL1P10243 752 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ATP6V1C1P21283 382 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 HOXA13P31271 388 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 STX2P32856 288 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 COILP38432 576 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 PLTPP55058 493 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 RPL36AP83881 106 aaKnown RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 CDK18Q07002 472 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SPP2Q13103 211 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 GIT2Q14161 759 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SLC45A4Q5BKX6 768 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ANKRD20A2Q5SQ80 823 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ANKRD20A1Q5TYW2 823 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ANKRD20A3Q5VUR7 823 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 CCDC137Q6PK04 289 aaKnown RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SLC30A9Q6PML9 568 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 INTS8Q75QN2 995 aaKnown RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ENOSF1Q7L5Y1 443 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ANKS1BQ7Z6G8 1248 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 TBC1D1Q86TI0 1168 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 FAM160B2Q86V87 743 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 GPBP1Q86WP2 473 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 GATAD2AQ86YP4 633 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 KLBQ86Z14 1044 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 C12orf56Q8IXR9 622 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SYTL1Q8IYJ3 562 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 LRRC34Q8IZ02 419 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SCYL3Q8IZE3 742 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 SLC25A41Q8N5S1 370 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 CCDC89Q8N998 374 aa4.6□□□□□ -1.67
LMBR1-216ENST00000477983 ATP8B4Q8TF62 1192 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms