RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PREPP48147 710 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 TNFSF10P50591 281 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 STX17P56962 302 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 MAXP61244 160 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 FOLH1Q04609 750 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 RBPJQ06330 500 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 PTP4A2Q12974 167 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 RPE65Q16518 533 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 GBP6Q6ZN66 633 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 LINC00696Q6ZRV3 163 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 NOP9Q86U38 636 aaKnown RBP7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 LRRTM4Q86VH4 590 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 PACS2Q86VP3 889 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 DNAJB8Q8NHS0 232 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 EID2BQ96D98 161 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 NDC1Q9BTX1 674 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 SOHLH2Q9NX45 425 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 ZNF835Q9Y2P0 537 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 FER1L5A0AVI2 2057 aa7.1□□□□□ -1.27
SPTLC1-205ENST00000477888 SEC16AO15027 2179 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 TRAV17A0A0B4J275 112 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 GTPBP10A4D1E9 387 aaKnown RBP7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 OR6C74A6NCV1 312 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 SOCS6O14544 535 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 CCP110O43303 1012 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 CRYABP02511 175 aaKnown RBP7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 MMEP08473 750 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 GPD1P21695 349 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 HALP42357 657 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 ZNF143P52747 638 aaPredicted RBP7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 DCDP81605 110 aaKnown RBP7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 STIM1Q13586 685 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 PKP1Q13835 747 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 CEBPEQ15744 281 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 CA9Q16790 459 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 ZFYVE27Q5T4F4 411 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 RHBDD2Q6NTF9 364 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 KIRREL2Q6UWL6 708 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 Q6ZPB1 254 aaPredicted RBP7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 RFX8Q6ZV50 586 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 NCCRP1Q6ZVX7 275 aaPredicted RBP7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 OOSP2Q86WS3 158 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 SLC30A5Q8TAD4 765 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 TEKT4Q8WW24 435 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 NELFBQ8WX92 580 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 SPATA32Q96LK8 384 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 SLC7A5P2Q9GIP4 190 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 GPAMQ9HCL2 828 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 C1GALT1Q9NS00 363 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 GPN3Q9UHW5 284 aaPredicted RBP7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 DNPEPQ9ULA0 475 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 CDYLQ9Y232 598 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 VPS13CQ709C8 3753 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 ATRQ13535 2644 aa7.09□□□□□ -1.27
SPTLC1-205ENST00000477888 FLNAP21333 2647 aaKnown RBP7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 C1orf232A0A0U1RR37 186 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 TCRBV5S1A1TA0A578 114 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 BICDL2A1A5D9 508 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 SIGLEC16A6NMB1 481 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 EEF2KO00418 725 aaKnown RBP7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 MAFKO60675 156 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 KCNJ13O60928 360 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 MTX2O75431 263 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 CDK14O94921 469 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 SMC2O95347 1197 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 NUDT7P0C024 238 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 UNGP13051 313 aaPredicted RBP7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 CDH3P22223 829 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 PPP1R2P41236 205 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 GSCP56915 257 aaPredicted RBP7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 KRT85P78386 507 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 ARG2P78540 354 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 DMPKQ09013 629 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 GALNT3Q14435 633 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 PCOLCEQ15113 449 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 KHDC1Q4VXA5 237 aaKnown RBP7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 C1orf189Q5VU69 101 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 IRAK1BP1Q5VVH5 260 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 ISM2Q6H9L7 571 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 KLHL10Q6JEL2 608 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 ARMC6Q6NXE6 501 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 CDHR3Q6ZTQ4 885 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 TMEM200AQ86VY9 491 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 SPPL2CQ8IUH8 684 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 ANKRD20A12PQ8NF67 263 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 PROKR1Q8TCW9 393 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 ZFPM2Q8WW38 1151 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 PSMF1Q92530 271 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 HAS2Q92819 552 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 SMARCE1Q969G3 411 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 GLYATL1Q969I3 302 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 CCDC34Q96HJ3 373 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 THOC3Q96J01 351 aaKnown RBP7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 ALPK1Q96QP1 1244 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 C11orf70Q9BRQ4 267 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 AP1M1Q9BXS5 423 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 PITPNM3Q9BZ71 974 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 LIME1Q9H400 295 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 SLC22A11Q9NSA0 550 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms