RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 OR4D9Q8NGE8 314 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 STYXQ8WUJ0 223 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 HDAC10Q969S8 669 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 RMDN2Q96LZ7 410 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 INSM2Q96T92 566 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-209ENST00000477554 FAM129AQ9BZQ8 928 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 DPH5Q9H2P9 285 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 ANKZF1Q9H8Y5 726 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 SLC40A1Q9NP59 571 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 CHRAC1Q9NRG0 131 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 LHX6Q9UPM6 363 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 ATMQ13315 3056 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 ERI2A8K979 691 aaKnown RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 KIF1CO43896 1103 aaKnown RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 SEC31AO94979 1220 aaKnown RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 GOT2P00505 430 aaKnown RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 ITGA2BP08514 1039 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 F7P08709 466 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 ATP1B2P14415 290 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 RBMS1P29558 406 aaKnown RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 HADHAP40939 763 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 PPM1FP49593 454 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 CDK16Q00536 496 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 SQSTM1Q13501 440 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 CUL1Q13616 776 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 BCL7AQ4VC05 210 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 AGAP9Q5VTM2 703 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 IZUMO3Q5VZ72 239 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 METRNLQ641Q3 311 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 IGF2-ASQ6U949 168 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 WASH2PQ6VEQ5 465 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 CLEC14AQ86T13 490 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 LINC00523Q86TU6 105 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 HOOK3Q86VS8 718 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 OR2L2Q8NH16 312 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 USP7Q93009 1102 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 GRAMD1AQ96CP6 724 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 COPS8Q99627 209 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 ZCCHC2Q9C0B9 1178 aaKnown RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 STRADBQ9C0K7 418 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 WASH6PQ9NQA3 447 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 ZDHHC3Q9NYG2 299 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 MARCH4Q9P2E8 410 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-209ENST00000477554 TCAF1Q9Y4C2 921 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 SDK2Q58EX2 2172 aa17.28■□□□□ 0.36
PTPN7-209ENST00000477554 PTPRQQ9UMZ3 2332 aa17.27■□□□□ 0.36
PTPN7-209ENST00000477554 MGAT4DA6NG13 374 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 CTIFO43310 598 aaKnown RBP17.27■□□□□ 0.35
PTPN7-209ENST00000477554 TMEM63AO94886 807 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 VIPP01282 170 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 JMJD7P0C870 316 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 NMBRP28336 390 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 PDHA2P29803 388 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 MAGEA6P43360 314 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 PREPP48147 710 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 PRLHRP49683 370 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 PCBP4P57723 403 aaKnown RBP17.27■□□□□ 0.35
PTPN7-209ENST00000477554 ERVPABLB-1P60509 514 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 GPLD1P80108 840 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 PDE1BQ01064 536 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 MORF4L2Q15014 288 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 TMEM71Q6P5X7 295 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 ZFAND4Q86XD8 727 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 CFAP206Q8IYR0 622 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 MPP5Q8N3R9 675 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 OR10G6Q8NH81 332 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 CPT1BQ92523 772 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 AHCYL2Q96HN2 611 aaKnown RBP17.27■□□□□ 0.35
PTPN7-209ENST00000477554 ZMYND15Q9H091 742 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 CPNE5Q9HCH3 593 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 EIF2B3Q9NR50 452 aaKnown RBP17.27■□□□□ 0.35
PTPN7-209ENST00000477554 THSD1Q9NS62 852 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 SYBUQ9NX95 663 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 PDP2Q9P2J9 529 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 ANAPC5Q9UJX4 755 aa17.27■□□□□ 0.35
PTPN7-209ENST00000477554 ESYT3A0FGR9 886 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 LILRA5A6NI73 299 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 OR5K4A6NMS3 321 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 DUX1O43812 170 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 TPSB2P20231 275 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 MGAT1P26572 445 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 ITGA8P53708 1063 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 SARNPP82979 210 aaKnown RBP17.26■□□□□ 0.35
PTPN7-209ENST00000477554 CACNG1Q06432 222 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 KCNJ11Q14654 390 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 TPSAB1Q15661 275 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 RNASEH2BQ5TBB1 312 aaKnown RBP17.26■□□□□ 0.35
PTPN7-209ENST00000477554 TRIM48Q8IWZ4 208 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 AGGF1Q8N302 714 aaeCLIP17.26■□□□□ 0.35
PTPN7-209ENST00000477554 BMPERQ8N8U9 685 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 EIF1ADQ8N9N8 165 aaKnown RBP17.26■□□□□ 0.35
PTPN7-209ENST00000477554 LKAAEAR1Q8TD35 194 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 IFT81Q8WYA0 676 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 ULK4Q96C45 1275 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 CXorf40BQ96DE9 158 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 CTRCQ99895 268 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 APMAPQ9HDC9 416 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 IMP3Q9NV31 184 aaKnown RBP17.26■□□□□ 0.35
PTPN7-209ENST00000477554 GRHL1Q9NZI5 618 aa17.26■□□□□ 0.35
PTPN7-209ENST00000477554 IGSF10Q6WRI0 2623 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms