RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CPA3P15088 417 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 VCLP18206 1134 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GABRG2P18507 467 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 FDXRP22570 491 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 RPA3P35244 121 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TRIM23P36406 574 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GPR1P46091 355 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GCGRP47871 477 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 CSRP3P50461 194 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 CCR5P51681 352 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 HK2P52789 917 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 COPAP53621 1224 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TAS2R39P59534 338 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 YPEL5P62699 121 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TMEM115Q12893 351 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 RALGDSQ12967 914 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PDE1CQ14123 709 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 EFTUD2Q15029 972 aaKnown RBP eCLIP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 LRRC14Q15048 493 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 WDR45BQ5MNZ6 344 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PLEKHS1Q5SXH7 462 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 FAM182AQ5T1J6 154 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PIP5KL1Q5T9C9 394 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3GQ6DHY5 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3CQ6IPX1 549 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PNCKQ6P2M8 343 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 BRICD5Q6PL45 260 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 FAM151BQ6UXP7 276 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 ADAMTSL4Q6UY14 1074 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 Q6ZVL8 140 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 MICALCLQ6ZW33 695 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 OTOAQ7RTW8 1153 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GLRX5Q86SX6 157 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TSPAN33Q86UF1 283 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TAX1BP1Q86VP1 789 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 HORMAD1Q86X24 394 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PHYKPLQ8IUZ5 450 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 NUDCD3Q8IVD9 361 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 SLC41A1Q8IVJ1 513 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 NAXDQ8IW45 347 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 RGL4Q8IZJ4 473 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 TBC1D3Q8IZP1 549 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 C4orf33Q8N1A6 199 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PNPLA1Q8N8W4 532 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 CCDC63Q8NA47 563 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 DDHD1Q8NEL9 900 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 OR2I1PQ8NGU4 316 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 OR2T34Q8NGX1 318 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 OR14C36Q8NHC7 312 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GDAP1Q8TB36 358 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 FOXJ1Q92949 421 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GLYATL1Q969I3 302 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 NUS1Q96E22 293 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 SERAC1Q96JX3 654 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 MRGPRX1Q96LB2 322 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 LINC00615Q96LM1 132 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 HSPA12BQ96MM6 686 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 CAMK1GQ96NX5 476 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 BIRC8Q96P09 236 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 ACOX2Q99424 681 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 SIKE1Q9BRV8 207 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 RIOK2Q9BVS4 552 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 SLC17A9Q9BYT1 436 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 DERL2Q9GZP9 239 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 EPN3Q9H201 632 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 P2RY12Q9H244 342 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 MRPL46Q9H2W6 279 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 MANSC1Q9H8J5 431 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A7Q9HAW7 530 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A10Q9HAW8 530 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A8Q9HAW9 530 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PFDN4Q9NQP4 134 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 FBXO6Q9NRD1 293 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PHPT1Q9NRX4 125 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 DKK4Q9UBT3 224 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 CTNNAL1Q9UBT7 734 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GGT7Q9UJ14 662 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 DMTF1Q9Y222 760 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 CRYL1Q9Y2S2 319 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 PSAT1Q9Y617 370 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 ITPR1Q14643 2758 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 GCN1Q92616 2671 aaKnown RBP6.92□□□□□ -1.3
SHQ1-207ENST00000475558 KNL1Q8NG31 2342 aa6.92□□□□□ -1.3
SHQ1-207ENST00000475558 CABIN1Q9Y6J0 2220 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CCDC78A2IDD5 438 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 A8MX80 341 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SLCO1B7G3V0H7 640 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 TERTO14746 1132 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MID1O15344 667 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 TRIM13O60858 407 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MMP20O60882 483 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SHOX2O60902 331 aaPredicted RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SMIM24O75264 130 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CDK14O94921 469 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 TGDSO95455 350 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PRKCGP05129 697 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 ENO2P09104 434 aaPredicted RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 HIST1H2AGP0C0S8 130 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms