RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 IL26Q9NPH9 171 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 SCHIP1Q9P0W5 487 aaPredicted RBP14.83□□□□□ -0.04
VARS-223ENST00000474643 PILRAQ9UKJ1 303 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 PSMD13Q9UNM6 376 aa14.83□□□□□ -0.04
VARS-223ENST00000474643 MN1Q10571 1320 aaPredicted RBP14.83□□□□□ -0.04
VARS-223ENST00000474643 UGT1A9O60656 530 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 POP7O75817 140 aaKnown RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 PRAMEF1O95521 474 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 ANKRD34CP0C6C1 535 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 UGT1A6P19224 532 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 WT1P19544 449 aaPredicted RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 UGT1A1P22309 533 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 UGT1A4P22310 534 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 CAPZBP47756 277 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 CDH17Q12864 832 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 SEMA5AQ13591 1074 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 GPR18Q14330 331 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 PTPRCAPQ14761 206 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 LINC00303Q3SY05 128 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 KHDC1Q4VXA5 237 aaKnown RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 FNBP1LQ5T0N5 605 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 GPRC6AQ5T6X5 926 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 DENND5AQ6IQ26 1287 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 ARMC6Q6NXE6 501 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 CCDC137Q6PK04 289 aaKnown RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 TMEM220Q6QAJ8 160 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 SYT10Q6XYQ8 523 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 KLHDC8BQ8IXV7 354 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 UNC5BQ8IZJ1 945 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 BMPERQ8N8U9 685 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 EXD3Q8N9H8 876 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 KIF18AQ8NI77 898 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 GRK7Q8WTQ7 553 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 ZNF514Q96K75 400 aaPredicted RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 C16orf45Q96MC5 204 aaPredicted RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 OR6C1Q96RD1 312 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 UGT1A7Q9HAW7 530 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 UGT1A10Q9HAW8 530 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 UGT1A8Q9HAW9 530 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 IMP3Q9NV31 184 aaKnown RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 ZNF624Q9P2J8 865 aaPredicted RBP14.82□□□□□ -0.04
VARS-223ENST00000474643 FKBPLQ9UIM3 349 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 LNPEPQ9UIQ6 1025 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 CRLS1Q9UJA2 301 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 KCTD3Q9Y597 815 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 PCDHB3Q9Y5E6 796 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 SDK2Q58EX2 2172 aa14.82□□□□□ -0.04
VARS-223ENST00000474643 CCDC78A2IDD5 438 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 TOX3O15405 576 aaPredicted RBP14.81□□□□□ -0.04
VARS-223ENST00000474643 PHF2O75151 1096 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 KRT14P02533 472 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 SLC35G4P0C7Q5 338 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 COILP38432 576 aaPredicted RBP14.81□□□□□ -0.04
VARS-223ENST00000474643 HADHAP40939 763 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 ARSDP51689 593 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 KCNC4Q03721 635 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 ABHD18Q0P651 414 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 C16orf46Q6P387 395 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 ABRAXAS1Q6UWZ7 409 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 WASH2PQ6VEQ5 465 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 ZNF547Q8IVP9 402 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 BEND7Q8N7W2 519 aaPredicted RBP14.81□□□□□ -0.04
VARS-223ENST00000474643 DDHD1Q8NEL9 900 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 OR13C4Q8NGS5 318 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 RSC1A1Q92681 617 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 SLC12A9Q9BXP2 914 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 ASB8Q9H765 288 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 SLC40A1Q9NP59 571 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 WASH6PQ9NQA3 447 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 SLC30A1Q9Y6M5 507 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 COL6A6A6NMZ7 2263 aa14.81□□□□□ -0.04
VARS-223ENST00000474643 ZNF106Q9H2Y7 1883 aaKnown RBP14.8□□□□□ -0.04
VARS-223ENST00000474643 CFAP99D6REC4 459 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 PYCARD-AS1I3L0S3 204 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 GPR39O43194 453 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 CCNYL3P0C7X3 344 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 TCN2P20062 427 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 PAFAH1B1P43034 410 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 LEPRP48357 1165 aaKnown RBP14.8□□□□□ -0.04
VARS-223ENST00000474643 POLE2P56282 527 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 GPS1Q13098 491 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 KCNAB2Q13303 367 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 LAMB3Q13751 1172 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 IL11RAQ14626 422 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 PPP1R7Q15435 360 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
VARS-223ENST00000474643 TTC27Q6P3X3 843 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 C6orf15Q6UXA7 325 aaPredicted RBP14.8□□□□□ -0.04
VARS-223ENST00000474643 ATG14Q6ZNE5 492 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 RASGEF1AQ8N9B8 481 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 SIDT2Q8NBJ9 832 aaKnown RBP14.8□□□□□ -0.04
VARS-223ENST00000474643 ZNF398Q8TD17 642 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 STARD8Q92502 1023 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 RNF31Q96EP0 1072 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 SLC45A3Q96JT2 553 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 TRIM4Q9C037 500 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 SLC25A18Q9H1K4 315 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 ADNPQ9H2P0 1102 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 ZNF768Q9H5H4 540 aaKnown RBP14.8□□□□□ -0.04
VARS-223ENST00000474643 PDE7BQ9NP56 450 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms