RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 MVPQ14764 893 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 PUM3Q15397 648 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 MTHFSDQ2M296 383 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 GTDC1Q4AE62 458 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 GPRIN3Q6ZVF9 776 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 CENPQQ7L2Z9 268 aaPredicted RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 MCM10Q7L590 875 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 LINGO2Q7L985 606 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 HPS6Q86YV9 775 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 NGEFQ8N5V2 710 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 OR6Y1Q8NGX8 325 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 FRAT1Q92837 279 aaPredicted RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 LRRC59Q96AG4 307 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 ELAC2Q9BQ52 826 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 SOSTQ9BQB4 213 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 SLC25A18Q9H1K4 315 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 MYH16Q9H6N6 1097 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 ESRP2Q9H6T0 727 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 CHODLQ9H9P2 273 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 SIX2Q9NPC8 291 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 NLRC4Q9NPP4 1024 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 ZNF71Q9NQZ8 489 aaPredicted RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 SMC4Q9NTJ3 1288 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 DACT1Q9NYF0 836 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 EPHA6Q9UF33 1036 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 CD207Q9UJ71 328 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 DNAH12Q6ZR08 3092 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 CEP350Q5VT06 3117 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 KIF16BQ96L93 1317 aa1.61□□□□□ -2.15
CCDC39-203ENST00000473854 SPTBN5Q9NRC6 3674 aaKnown RBP1.61□□□□□ -2.15
CCDC39-203ENST00000473854 FER1L6Q2WGJ9 1857 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 ADCY9O60503 1353 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 CPDO75976 1380 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 PLEKHG2Q9H7P9 1386 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 HEG1Q9ULI3 1381 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 LTBP1Q14766 1721 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 MYH4Q9Y623 1939 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 SCN9AQ15858 1988 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 C17orf113A0A1B0GUU1 675 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 IFIT2P09913 472 aaKnown RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 ETFAP13804 333 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 DDIT3P35638 169 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 WNT5AP41221 380 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 ARCN1P48444 511 aaKnown RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 METAP2P50579 478 aaKnown RBP eCLIP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 PRKAA2P54646 552 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 RHBDL3P58872 404 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 TWISTNBQ3B726 338 aaPredicted RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 ALDH1L2Q3SY69 923 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 RNF212Q495C1 297 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 CBWD5Q5RIA9 395 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 GGNBP1Q5YKI7 109 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 FRG2Q64ET8 278 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 SEL1L3Q68CR1 1132 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 BRAT1Q6PJG6 821 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 TOGARAM2Q6ZUX3 1019 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 MOB3CQ70IA8 216 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 BRINP3Q76B58 766 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 G2E3Q7L622 706 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 SLC46A3Q7Z3Q1 461 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 ITPRIPQ8IWB1 547 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 CPXM2Q8N436 756 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 IL17REQ8NFR9 667 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 RUBCNQ92622 972 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 GIMAP5Q96F15 307 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 LTV1Q96GA3 475 aaPredicted RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 RMDN3Q96TC7 470 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 MPHOSPH6Q99547 160 aaKnown RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 SLC32A1Q9H598 525 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 G6PC2Q9NQR9 355 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 ECHDC1Q9NTX5 307 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 MIS18AQ9NYP9 233 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 TAGLN3Q9UI15 199 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 TUBE1Q9UJT0 475 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 SUFUQ9UMX1 484 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 LAS1LQ9Y4W2 734 aaKnown RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 SIPA1L1O43166 1804 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 ATAD5Q96QE3 1844 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 LAMA2P24043 3122 aaKnown RBP1.6□□□□□ -2.15
CCDC39-203ENST00000473854 TIAM2Q8IVF5 1701 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 LAMA3Q16787 3333 aa1.6□□□□□ -2.15
CCDC39-203ENST00000473854 SLX4Q8IY92 1834 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 KIF13BQ9NQT8 1826 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 RIC1Q4ADV7 1423 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 HTTP42858 3142 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 IGHV4-4A0A075B6R2 117 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 ABHD14A-ACY1A0A1B0GW23 586 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 TMEM202A6NGA9 273 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 STX16-NPEPL1H3BU86 382 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 STX16O14662 325 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 NADKO95544 446 aaPredicted RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 LIFP15018 202 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 CST5P28325 142 aaPredicted RBP1.59□□□□□ -2.15
CCDC39-203ENST00000473854 ELF1P32519 619 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 HNF4AP41235 474 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 ICA1Q05084 483 aa1.59□□□□□ -2.15
CCDC39-203ENST00000473854 FOXM1Q08050 763 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms