RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 BCL7AQ4VC05 210 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 TRAPPC5Q8IUR0 188 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 PDPRQ8NCN5 879 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 DLG3Q92796 817 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 ESAMQ96AP7 390 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 TMEM159Q96B96 161 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 TRIM54Q9BYV2 358 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 RDH14Q9HBH5 336 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 TNFRSF12AQ9NP84 129 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 MID1IP1Q9NPA3 183 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 SEMA4BQ9NPR2 832 aaPredicted RBP18.62■□□□□ 0.57
SMC4-209ENST00000468653 ATXN10Q9UBB4 475 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 EIF2B4Q9UI10 523 aaKnown RBP18.62■□□□□ 0.57
SMC4-209ENST00000468653 PCTPQ9UKL6 214 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 PABPN1LA6NDY0 278 aaKnown RBP18.61■□□□□ 0.57
SMC4-209ENST00000468653 SHISA7A6NL88 538 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 GPC4O75487 556 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 SLCO2B1O94956 709 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 SERPINA6P08185 405 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 SH3BP2P78314 561 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 SFSWAPQ12872 951 aaKnown RBP18.61■□□□□ 0.57
SMC4-209ENST00000468653 LCP2Q13094 533 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 AGERQ15109 404 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 SPDYAQ5MJ70 313 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 KIAA1161Q6NSJ0 714 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 KIAA1324Q6UXG2 1013 aaKnown RBP18.61■□□□□ 0.57
SMC4-209ENST00000468653 NEK10Q6ZWH5 1172 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 UBE2R2Q712K3 238 aaPredicted RBP18.61■□□□□ 0.57
SMC4-209ENST00000468653 HEATR4Q86WZ0 1026 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 ZNF483Q8TF39 744 aaPredicted RBP18.61■□□□□ 0.57
SMC4-209ENST00000468653 KLK6Q92876 244 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 FAM131CQ96AQ9 280 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 ZNF514Q96K75 400 aaPredicted RBP18.61■□□□□ 0.57
SMC4-209ENST00000468653 HGH1Q9BTY7 390 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 OSBPL6Q9BZF3 934 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 TCF7L2Q9NQB0 619 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 CDYLQ9Y232 598 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 TRPM6Q9BX84 2022 aa18.61■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3DA0A087WVF3 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3IA0A087WXS9 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3EA0A087X179 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3KA0A087X1G2 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 GOLGA8QA0A0J9YX86 632 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 A0A1W2PQU0 124 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 GOLGA8OA6NCC3 632 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3FA6NER0 549 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 TMEM202A6NGA9 273 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3LB9A6J9 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 GOLGA8NF8WBI6 632 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 MAN2B1O00754 1011 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 RNGTTO60942 597 aaKnown RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 MLYCDO95822 493 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 PAK4O96013 591 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3HP0C7X1 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 ADPRHP54922 357 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 PCBP2Q15366 365 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3GQ6DHY5 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 SULT1C3Q6IMI6 304 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3CQ6IPX1 549 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TMEM92Q6UXU6 159 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 ACAD11Q709F0 780 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 KBTBD6Q86V97 674 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 TBC1D3Q8IZP1 549 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 ASB11Q8WXH4 323 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 PRR11Q96HE9 360 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 MRGPRX1Q96LB2 322 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 GUCD1Q96NT3 240 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 WDR55Q9H6Y2 383 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 TXLNGQ9NUQ3 528 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 WWOXQ9NZC7 414 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 PTBP2Q9UKA9 531 aaKnown RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 FZD4Q9ULV1 537 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 MMP17Q9ULZ9 603 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 ANKRD12Q6UB98 2062 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 PPP6CO00743 305 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 SKAP2O75563 359 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 ENO2P09104 434 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 HIST1H2AGP0C0S8 130 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 ZNF8P17098 575 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 HIST1H2ADP20671 130 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 RPIAP49247 311 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 CORO7P57737 925 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 SP140Q13342 867 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 MLF2Q15773 248 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 RBBP7Q16576 425 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 C18orf21Q32NC0 220 aaPredicted RBP18.6■□□□□ 0.57
SMC4-209ENST00000468653 USP30Q70CQ3 517 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 FAM124AQ86V42 546 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 CLYBLQ8N0X4 340 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 OR56A4Q8NGH8 313 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 COX14Q96I36 57 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 HIST1H2AHQ96KK5 128 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 HIST1H2AJQ99878 128 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 H2AFJQ9BTM1 129 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 C1QTNF7Q9BXJ2 289 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 C1QTNF2Q9BXJ5 285 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 SLC12A9Q9BXP2 914 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 PARVBQ9HBI1 364 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 PREBQ9HCU5 417 aa18.6■□□□□ 0.57
SMC4-209ENST00000468653 SAR1AQ9NR31 198 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms