RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 LACRTQ9GZZ8 138 aa23.9■■□□□ 1.42
PTCH1-210ENST00000468211 HRASLS2Q9NWW9 162 aa23.9■■□□□ 1.42
PTCH1-210ENST00000468211 SLC24A2Q9UI40 661 aa23.9■■□□□ 1.42
PTCH1-210ENST00000468211 EFR3BQ9Y2G0 817 aa23.9■■□□□ 1.42
PTCH1-210ENST00000468211 AGAP14A8MT82 685 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 K7EM74 188 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 POLBP06746 335 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 CTNNA2P26232 953 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 ARCN1P48444 511 aaKnown RBP23.89■■□□□ 1.41
PTCH1-210ENST00000468211 ZNF140P52738 457 aaPredicted RBP23.89■■□□□ 1.41
PTCH1-210ENST00000468211 DNASE1L3Q13609 305 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 BCL7AQ4VC05 210 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 DNTTIP2Q5QJE6 756 aaKnown RBP23.89■■□□□ 1.41
PTCH1-210ENST00000468211 KLHL35Q6PF15 583 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 FBXO38Q6PIJ6 1188 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 SPATA13Q96N96 652 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 PDE7BQ9NP56 450 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 LHX9Q9NQ69 397 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 RARRES3Q9UL19 164 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 PADI1Q9ULC6 663 aa23.89■■□□□ 1.41
PTCH1-210ENST00000468211 AAR2Q9Y312 384 aaKnown RBP23.89■■□□□ 1.41
PTCH1-210ENST00000468211 SPENQ96T58 3664 aaKnown RBP23.89■■□□□ 1.41
PTCH1-210ENST00000468211 ARHGAP6O43182 974 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 NTRK1P04629 796 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 PYGMP11217 842 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 NR1D1P20393 614 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 RAD9BQ6WBX8 426 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 LINC00615Q96LM1 132 aaPredicted RBP23.88■■□□□ 1.41
PTCH1-210ENST00000468211 LUC7LQ9NQ29 371 aaKnown RBP23.88■■□□□ 1.41
PTCH1-210ENST00000468211 FGF21Q9NSA1 209 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 ACSL5Q9ULC5 683 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 PCDHB3Q9Y5E6 796 aa23.88■■□□□ 1.41
PTCH1-210ENST00000468211 RELNP78509 3460 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 TNRC6AQ8NDV7 1962 aaKnown RBP23.87■■□□□ 1.41
PTCH1-210ENST00000468211 OR6C74A6NCV1 312 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 TLCD2A6NGC4 264 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 CCNYL3P0C7X3 344 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 CDKN1CP49918 316 aaPredicted RBP23.87■■□□□ 1.41
PTCH1-210ENST00000468211 PRPSAP1Q14558 356 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 CAPRIN2Q6IMN6 1127 aaKnown RBP23.87■■□□□ 1.41
PTCH1-210ENST00000468211 FAM199XQ6PEV8 388 aaPredicted RBP23.87■■□□□ 1.41
PTCH1-210ENST00000468211 CFAP206Q8IYR0 622 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 NXPE1Q8N323 547 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 D2HGDHQ8N465 521 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 LRRC57Q8N9N7 239 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 PANX2Q96RD6 677 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 CD180Q99467 661 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 NRTNQ99748 197 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 TBL1YQ9BQ87 522 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 KIR3DX1Q9H7L2 352 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 CRLS1Q9UJA2 301 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 TP53TG5Q9Y2B4 290 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 PCDHGA6Q9Y5G7 932 aa23.87■■□□□ 1.41
PTCH1-210ENST00000468211 UBA6A0AVT1 1052 aaPredicted RBP23.86■■□□□ 1.41
PTCH1-210ENST00000468211 CCDC66A2RUB6 948 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 CDC14CA4D256 554 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 LDB2O43679 373 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 CREG1O75629 220 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 CRTAMO95727 393 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 SLC35G4P0C7Q5 338 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 PRSS56P0CW18 603 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 CASRP41180 1078 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 ZNF75DP51815 510 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 KPNA2P52292 529 aaKnown RBP23.86■■□□□ 1.41
PTCH1-210ENST00000468211 RWDD2BP57060 319 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 GPR19Q15760 415 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 IGFBP7Q16270 282 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 OOSP2Q86WS3 158 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 KMT5CQ86Y97 462 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 KLHDC8BQ8IXV7 354 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 ACRBPQ8NEB7 543 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 FERMT1Q9BQL6 677 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 ARNT2Q9HBZ2 717 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 ANAPC2Q9UJX6 822 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 KCND3Q9UK17 655 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 MED13Q9UHV7 2174 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 DOPEY2Q9Y3R5 2298 aa23.86■■□□□ 1.41
PTCH1-210ENST00000468211 PIPSLA2A3N6 862 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 GRID2IPA4D2P6 1211 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 DDX3YO15523 660 aaKnown RBP23.85■■□□□ 1.41
PTCH1-210ENST00000468211 MT-ND3P03897 115 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 PRLHRP49683 370 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 NAP1L1P55209 391 aaKnown RBP23.85■■□□□ 1.41
PTCH1-210ENST00000468211 RPS18P62269 152 aaKnown RBP23.85■■□□□ 1.41
PTCH1-210ENST00000468211 HSD11B2P80365 405 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 ACY1Q03154 408 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 SEPT6Q14141 434 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 LACTB2Q53H82 288 aaPredicted RBP23.85■■□□□ 1.41
PTCH1-210ENST00000468211 ZFPM2Q8WW38 1151 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 DCUN1D1Q96GG9 259 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 FCRL4Q96PJ5 515 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 TWSG1Q9GZX9 223 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 ACTL8Q9H568 366 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 POLHQ9Y253 713 aa23.85■■□□□ 1.41
PTCH1-210ENST00000468211 BTNL10A8MVZ5 291 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 STK10O94804 968 aaKnown RBP23.84■■□□□ 1.41
PTCH1-210ENST00000468211 POLR2CP19387 275 aaPredicted RBP23.84■■□□□ 1.41
PTCH1-210ENST00000468211 ARL4DP49703 201 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 GSE1Q14687 1217 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 ZNF658BQ4V348 819 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms