RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ST6GALNAC3Q8NDV1 305 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 IMP4Q96G21 291 aaKnown RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 C12orf66Q96MD2 445 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 INSM2Q96T92 566 aaPredicted RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 BARD1Q99728 777 aaKnown RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 DHRS4Q9BTZ2 278 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 C1GALT1Q9NS00 363 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 OR2AG2A6NM03 316 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 LDB2O43679 373 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 HBQ1P09105 142 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 SKILP12757 684 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 PRF1P14222 555 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 POLR2CP19387 275 aaPredicted RBP14.08□□□□□ -0.16
SMC1A-204ENST00000463684 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.16
SMC1A-204ENST00000463684 IFI35P80217 286 aaPredicted RBP14.08□□□□□ -0.16
SMC1A-204ENST00000463684 SLC10A2Q12908 348 aaPredicted RBP14.08□□□□□ -0.16
SMC1A-204ENST00000463684 ZBTB17Q13105 803 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 GSE1Q14687 1217 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 LLGL1Q15334 1064 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 PPP2R5EQ16537 467 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 CRB2Q5IJ48 1285 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 ZDHHC20Q5W0Z9 365 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 OR1L3Q8NH93 324 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 PPM1MQ96MI6 270 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 C17orf62Q9BQA9 187 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 WWP1Q9H0M0 922 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 THAP2Q9H0W7 228 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 ZNF552Q9H707 407 aaPredicted RBP14.08□□□□□ -0.16
SMC1A-204ENST00000463684 KIR3DX1Q9H7L2 352 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 GPN3Q9UHW5 284 aaPredicted RBP14.08□□□□□ -0.16
SMC1A-204ENST00000463684 SLC24A2Q9UI40 661 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 ACSL5Q9ULC5 683 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 COLEC10Q9Y6Z7 277 aa14.08□□□□□ -0.16
SMC1A-204ENST00000463684 HIVEP3Q5T1R4 2406 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 E7EQ34 232 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 MATN2O00339 956 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 AURKAO14965 403 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UGT1A9O60656 530 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 NDST3O95803 873 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 CD63P08962 238 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UGT1A6P19224 532 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 HLA-DPA1P20036 260 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UGT1A1P22309 533 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UGT1A4P22310 534 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 NDUFS1P28331 727 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 CA5AP35218 305 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 HMGCLP35914 325 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 CTSCP53634 463 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 PPIDQ08752 370 aaKnown RBP14.07□□□□□ -0.16
SMC1A-204ENST00000463684 AP1B1Q10567 949 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 ZRSR2Q15696 482 aaKnown RBP14.07□□□□□ -0.16
SMC1A-204ENST00000463684 DCAF10Q5QP82 559 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 ZFYVE27Q5T4F4 411 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 MLIPQ5VWP3 458 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 SASS6Q6UVJ0 657 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 Q6ZS92 163 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 MRGPREQ86SM8 312 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 MCEMP1Q8IX19 187 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 PQLC3Q8N755 202 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 OR4E2Q8NGC2 313 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 INPP5DQ92835 1189 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 AGAP3Q96P47 875 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 CEP41Q9BYV8 373 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UNKQ9C0B0 810 aaKnown RBP14.07□□□□□ -0.16
SMC1A-204ENST00000463684 SLC25A51Q9H1U9 297 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UGT1A7Q9HAW7 530 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UGT1A10Q9HAW8 530 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 UGT1A8Q9HAW9 530 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 IL26Q9NPH9 171 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 ANO10Q9NW15 660 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 OSGIN2Q9Y236 505 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 NTNG1Q9Y2I2 539 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 PCDHGA10Q9Y5H3 936 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 FBN2P35556 2912 aa14.07□□□□□ -0.16
SMC1A-204ENST00000463684 ZNF749O43361 778 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 SLC35G4P0C7Q5 338 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 MSL3P1P0C860 447 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 SPAM1P38567 509 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 LONRF2Q1L5Z9 754 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 FNBP1LQ5T0N5 605 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 E4F1Q66K89 784 aaPredicted RBP14.06□□□□□ -0.16
SMC1A-204ENST00000463684 DUS1LQ6P1R4 473 aaKnown RBP14.06□□□□□ -0.16
SMC1A-204ENST00000463684 CUZD1Q86UP6 607 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 KCNMB4Q86W47 210 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 GPR135Q8IZ08 494 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 DDHD1Q8NEL9 900 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 DTX3LQ8TDB6 740 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 N4BP2L2Q92802 583 aaPredicted RBP14.06□□□□□ -0.16
SMC1A-204ENST00000463684 FAF2Q96CS3 445 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 SRMSQ9H3Y6 488 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 POMT2Q9UKY4 750 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 HEY1Q9Y5J3 304 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 SPO11Q9Y5K1 396 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 CSMD1Q96PZ7 3565 aa14.06□□□□□ -0.16
SMC1A-204ENST00000463684 HEATR9A2RTY3 570 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 GSAPA4D1B5 854 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 KLHL33A6NCF5 533 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 MGAT4DA6NG13 374 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms