RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR4C6Q8NH72 309 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 CEP76Q8TAP6 659 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SOCS4Q8WXH5 440 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 S100A16Q96FQ6 103 aaKnown RBP5.16□□□□□ -1.58
CSMD3-204ENST00000455883 EEF2KMTQ96G04 330 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 BTBD2Q9BX70 525 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 GDAP2Q9NXN4 497 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 VPS28Q9UK41 221 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MAFFQ9ULX9 164 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 MINPP1Q9UNW1 487 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 PKD1L3Q7Z443 1732 aa5.16□□□□□ -1.58
CSMD3-204ENST00000455883 SULT1C2O00338 296 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 GAD2Q05329 585 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 GOLGA7BQ2TAP0 167 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 OVOS1Q6IE37 1185 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 TMPRSS11BQ86T26 416 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SVBPQ8N300 66 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SETD7Q8WTS6 366 aaKnown RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 C16orf58Q96GQ5 468 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 INPP4AQ96PE3 977 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 YIPF4Q9BSR8 244 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 MCMBPQ9BTE3 642 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF334Q9HCZ1 680 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 KCNIP2Q9NS61 270 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 MOCS1Q9NZB8 636 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ANKHD1Q8IWZ3 2542 aaKnown RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ECM29Q5VYK3 1845 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 RGPD3A6NKT7 1758 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 RGPD4Q7Z3J3 1758 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 RFXANKO14593 260 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 STK16O75716 305 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 LPOP22079 712 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ADGRE1Q14246 886 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 DHCR24Q15392 516 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CLVS2Q5SYC1 327 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 MPP7Q5T2T1 576 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CYP20A1Q6UW02 462 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 C14orf80Q86SX3 495 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 TBC1D10CQ8IV04 446 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 MAP4K3Q8IVH8 894 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ZUFSPQ96AP4 578 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CYP2S1Q96SQ9 504 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SLAMF7Q9NQ25 335 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ARMC1Q9NVT9 282 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 PTGFRNQ9P2B2 879 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 UNCXA6NJT0 531 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ANXA2P2A6NMY6 339 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 FOXN3O00409 490 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 RCBTB2O95199 551 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CSF1RP07333 972 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ANXA2P07355 339 aaKnown RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 TFEBP19484 476 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 PTPN5P54829 565 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ERVK-9P63128 1117 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ADCK2Q7Z695 626 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 B3GALNT2Q8NCR0 500 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 FBXO32Q969P5 355 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 COL21A1Q96P44 957 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 HEBP1Q9NRV9 189 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 NUDT15Q9NV35 164 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 TRPC4Q9UBN4 977 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 PNMA8BQ9ULN7 279 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF780BQ9Y6R6 833 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 COLEC10Q9Y6Z7 277 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 USP27XA6NNY8 438 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 EFCAB9A8MZ26 197 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 UBFD1O14562 309 aaKnown RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 NCK2O43639 380 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CETPP11597 493 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 EFNA1P20827 205 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SMSP52788 366 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 NRG3P56975 720 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SP140Q13342 867 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SETMARQ53H47 684 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 FGD3Q5JSP0 725 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SCIMPQ6UWF3 145 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 PTCHD4Q6ZW05 846 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CYS1Q717R9 158 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 EPYCQ99645 322 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SEMA4AQ9H3S1 761 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 NMRK2Q9NPI5 230 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 GABRDO14764 452 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 OR10H3O60404 316 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ATG13O75143 517 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 TSPAN8P19075 237 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CYP3A5P20815 502 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 GLRA2P23416 452 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 KHKP50053 298 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SLC7A2P52569 658 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ERVK-8P63133 956 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 LLGL1Q15334 1064 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 DCST1Q5T197 706 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ILDR2Q71H61 639 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF227Q86WZ6 799 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC71Q8IV32 467 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 SLC35C1Q96A29 364 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 LGR4Q9BXB1 951 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 INPP5EQ9NRR6 644 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms