RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 LHPPQ9H008 270 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 ABI3Q9P2A4 366 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 FBXL4Q9UKA2 621 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 DNPEPQ9ULA0 475 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 WDR37Q9Y2I8 494 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 A0A0J9YYE9 177 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 E7EQ34 232 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 DAPK3O43293 454 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 ALOX12BO75342 701 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 TRBC1P01850 177 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 TPM3P06753 285 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 KRT3P12035 628 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 IL4RP24394 825 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 SPINT3P49223 89 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 AIF1P55008 147 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 ARG2P78540 354 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 MFAP5Q13361 173 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 IQCB1Q15051 598 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 EXOC3L4Q17RC7 722 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 HENMT1Q5T8I9 393 aaKnown RBP12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 ADGRG6Q86SQ4 1221 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 OOSP2Q86WS3 158 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 ARHGAP12Q8IWW6 846 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 BBS5Q8N3I7 341 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 NUDT8Q8WV74 236 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 NACC2Q96BF6 587 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 PPM1MQ96MI6 270 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 SMR3AQ99954 134 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 ZNF559Q9BR84 538 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 CBX8Q9HC52 389 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 IFT80Q9P2H3 777 aaPredicted RBP12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 TINAGQ9UJW2 476 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 MEMO1Q9Y316 297 aa12.21□□□□□ -0.45
AC004540.1-204ENST00000449537 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.46
AC004540.1-204ENST00000449537 TRAV17A0A0B4J275 112 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 FOXO6A8MYZ6 492 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 EEF2KO00418 725 aaKnown RBP12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 MAP3K7O43318 606 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 KLHL18O94889 574 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 UMODP07911 640 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 CBSLP0DN79 551 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 VCLP18206 1134 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 GPD1P21695 349 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 CDH3P22223 829 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 PON1P27169 355 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 CBSP35520 551 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 KPNA2P52292 529 aaKnown RBP12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 MAXP61244 160 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 NOMO3P69849 1222 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 DCDP81605 110 aaKnown RBP12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 CEBPEQ15744 281 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 MAN2A1Q16706 1144 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 CES4AQ5XG92 561 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 CA5BP1Q8WTZ4 195 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 THOC3Q96J01 351 aaKnown RBP12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 MGME1Q9BQP7 344 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 AKAP6Q13023 2319 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 STAB1Q9NY15 2570 aa12.2□□□□□ -0.46
AC004540.1-204ENST00000449537 DYTNA2CJ06 578 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 RGSL1A5PLK6 1076 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 OR6C74A6NCV1 312 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 FZD6O60353 706 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 MMP11P24347 488 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 MEOX1P50221 254 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 FOXL2P58012 376 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 ADAM8P78325 824 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 DSG2Q14126 1118 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 PCOLCEQ15113 449 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 RPE65Q16518 533 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 FILIP1LQ4L180 1135 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 C1orf189Q5VU69 101 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 WDR59Q6PJI9 974 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 ZNF547Q8IVP9 402 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 GPR135Q8IZ08 494 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 GPR150Q8NGU9 434 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 ARSGQ96EG1 525 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 SPATA16Q9BXB7 569 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 PKD2L2Q9NZM6 624 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 FHOD1Q9Y613 1164 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 PCM1Q15154 2024 aa12.19□□□□□ -0.46
AC004540.1-204ENST00000449537 FN1P02751 2386 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 GTPBP10A4D1E9 387 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CNOT3O75175 753 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CDK14O94921 469 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 RASAL1O95294 804 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 MMEP08473 750 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 ERCC2P18074 760 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CDK11BP21127 795 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 MMP8P22894 467 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 ADSLP30566 484 aaPredicted RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 MTIF2P46199 727 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 TNFSF10P50591 281 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CLEC9AQ6UXN8 241 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms