RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 OOSP2Q86WS3 158 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 OR13C4Q8NGS5 318 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 OR2L2Q8NH16 312 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 PPM1MQ96MI6 270 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 SLC24A2Q9UI40 661 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 TNRC6AQ8NDV7 1962 aaKnown RBP27.6■■■□□ 2.01
CBX4-202ENST00000448310 RELNP78509 3460 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 OR6C74A6NCV1 312 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 SGTAO43765 313 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 POLBP06746 335 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 TMPRSS15P98073 1019 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 XIAPP98170 497 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 ANKRD20A2Q5SQ80 823 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 ANKRD20A1Q5TYW2 823 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 ANKRD20A3Q5VUR7 823 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 FBXO38Q6PIJ6 1188 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 RMDN2Q96LZ7 410 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 CD180Q99467 661 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 TRIM5Q9C035 493 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 ACTL8Q9H568 366 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 FAM96AQ9H5X1 160 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 CRLS1Q9UJA2 301 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 ACSL5Q9ULC5 683 aa27.59■■■□□ 2.01
CBX4-202ENST00000448310 C5orf60A6NFR6 353 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 MKRN2OSH3BPM6 223 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 KCNN4O15554 427 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 SLC35G4P0C7Q5 338 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 CTNNA1P35221 906 aaKnown RBP27.58■■■□□ 2.01
CBX4-202ENST00000448310 EIF3EP60228 445 aaKnown RBP27.58■■■□□ 2.01
CBX4-202ENST00000448310 RPS18P62269 152 aaKnown RBP27.58■■■□□ 2.01
CBX4-202ENST00000448310 GPR19Q15760 415 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 BCL7AQ4VC05 210 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 MICALCLQ6ZW33 695 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 KMT5CQ86Y97 462 aa27.58■■■□□ 2.01
CBX4-202ENST00000448310 CDKL3Q8IVW4 592 aaPredicted RBP27.58■■■□□ 2.01
CBX4-202ENST00000448310 SPENQ96T58 3664 aaKnown RBP27.58■■■□□ 2.01
CBX4-202ENST00000448310 RCCD1A6NED2 376 aa27.57■■■□□ 2
CBX4-202ENST00000448310 C21orf140B9A014 251 aa27.57■■■□□ 2
CBX4-202ENST00000448310 CCL22O00626 93 aa27.57■■■□□ 2
CBX4-202ENST00000448310 DDX3YO15523 660 aaKnown RBP27.57■■■□□ 2
CBX4-202ENST00000448310 PJA2O43164 708 aa27.57■■■□□ 2
CBX4-202ENST00000448310 RBP3P10745 1247 aa27.57■■■□□ 2
CBX4-202ENST00000448310 KPNA2P52292 529 aaKnown RBP27.57■■■□□ 2
CBX4-202ENST00000448310 COPS2P61201 443 aa27.57■■■□□ 2
CBX4-202ENST00000448310 HSD11B2P80365 405 aa27.57■■■□□ 2
CBX4-202ENST00000448310 MSLNQ13421 630 aaPredicted RBP27.57■■■□□ 2
CBX4-202ENST00000448310 GSE1Q14687 1217 aa27.57■■■□□ 2
CBX4-202ENST00000448310 ARMC6Q6NXE6 501 aa27.57■■■□□ 2
CBX4-202ENST00000448310 CFAP206Q8IYR0 622 aa27.57■■■□□ 2
CBX4-202ENST00000448310 CCDC170Q8IYT3 715 aa27.57■■■□□ 2
CBX4-202ENST00000448310 D2HGDHQ8N465 521 aa27.57■■■□□ 2
CBX4-202ENST00000448310 CCDC110Q8TBZ0 833 aa27.57■■■□□ 2
CBX4-202ENST00000448310 FCRL4Q96PJ5 515 aa27.57■■■□□ 2
CBX4-202ENST00000448310 OSBPL8Q9BZF1 889 aa27.57■■■□□ 2
CBX4-202ENST00000448310 KIR3DX1Q9H7L2 352 aa27.57■■■□□ 2
CBX4-202ENST00000448310 TLK1Q9UKI8 766 aa27.57■■■□□ 2
CBX4-202ENST00000448310 MAN2B2Q9Y2E5 1009 aa27.57■■■□□ 2
CBX4-202ENST00000448310 AAR2Q9Y312 384 aaKnown RBP27.57■■■□□ 2
CBX4-202ENST00000448310 PCDHA3Q9Y5H8 950 aa27.57■■■□□ 2
CBX4-202ENST00000448310 PIKFYVEQ9Y2I7 2098 aa27.56■■■□□ 2
CBX4-202ENST00000448310 RFPL1O75677 317 aa27.56■■■□□ 2
CBX4-202ENST00000448310 DNAJB5O75953 348 aa27.56■■■□□ 2
CBX4-202ENST00000448310 CTNNA2P26232 953 aa27.56■■■□□ 2
CBX4-202ENST00000448310 CYLC1P35663 651 aaPredicted RBP27.56■■■□□ 2
CBX4-202ENST00000448310 KLRB1Q12918 225 aa27.56■■■□□ 2
CBX4-202ENST00000448310 SPARCL1Q14515 664 aa27.56■■■□□ 2
CBX4-202ENST00000448310 PRPSAP1Q14558 356 aa27.56■■■□□ 2
CBX4-202ENST00000448310 AADACL2Q6P093 401 aa27.56■■■□□ 2
CBX4-202ENST00000448310 DARS2Q6PI48 645 aaKnown RBP27.56■■■□□ 2
CBX4-202ENST00000448310 SARM1Q6SZW1 724 aa27.56■■■□□ 2
CBX4-202ENST00000448310 BPHLQ86WA6 291 aaPredicted RBP27.56■■■□□ 2
CBX4-202ENST00000448310 DCUN1D1Q96GG9 259 aa27.56■■■□□ 2
CBX4-202ENST00000448310 LINC00615Q96LM1 132 aaPredicted RBP27.56■■■□□ 2
CBX4-202ENST00000448310 FERMT1Q9BQL6 677 aa27.56■■■□□ 2
CBX4-202ENST00000448310 PLAAQ9Y263 795 aa27.56■■■□□ 2
CBX4-202ENST00000448310 MED13Q9UHV7 2174 aa27.55■■■□□ 2
CBX4-202ENST00000448310 LRRK2Q5S007 2527 aa27.55■■■□□ 2
CBX4-202ENST00000448310 ZBTB11O95625 1053 aaPredicted RBP27.55■■■□□ 2
CBX4-202ENST00000448310 POLR2CP19387 275 aaPredicted RBP27.55■■■□□ 2
CBX4-202ENST00000448310 ZNF140P52738 457 aaPredicted RBP27.55■■■□□ 2
CBX4-202ENST00000448310 PMS2P54278 862 aa27.55■■■□□ 2
CBX4-202ENST00000448310 TUBB4BP68371 445 aa27.55■■■□□ 2
CBX4-202ENST00000448310 TUBB2AQ13885 445 aa27.55■■■□□ 2
CBX4-202ENST00000448310 CAPRIN2Q6IMN6 1127 aaKnown RBP27.55■■■□□ 2
CBX4-202ENST00000448310 TCTN3Q6NUS6 607 aa27.55■■■□□ 2
CBX4-202ENST00000448310 TMEM126BQ8IUX1 230 aa27.55■■■□□ 2
CBX4-202ENST00000448310 OR4E2Q8NGC2 313 aa27.55■■■□□ 2
CBX4-202ENST00000448310 ZFPM2Q8WW38 1151 aa27.55■■■□□ 2
CBX4-202ENST00000448310 ZNF501Q96CX3 271 aaPredicted RBP27.55■■■□□ 2
CBX4-202ENST00000448310 TUBB2BQ9BVA1 445 aa27.55■■■□□ 2
CBX4-202ENST00000448310 LUC7LQ9NQ29 371 aaKnown RBP27.55■■■□□ 2
CBX4-202ENST00000448310 SOHLH2Q9NX45 425 aa27.55■■■□□ 2
CBX4-202ENST00000448310 DUSP10Q9Y6W6 482 aa27.55■■■□□ 2
CBX4-202ENST00000448310 AGAP14A8MT82 685 aa27.54■■■□□ 2
CBX4-202ENST00000448310 SCRG1O75711 98 aa27.54■■■□□ 2
CBX4-202ENST00000448310 CRTAMO95727 393 aa27.54■■■□□ 2
CBX4-202ENST00000448310 PRLHRP49683 370 aa27.54■■■□□ 2
CBX4-202ENST00000448310 KRT33BQ14525 404 aa27.54■■■□□ 2
CBX4-202ENST00000448310 DENND5AQ6IQ26 1287 aa27.54■■■□□ 2
CBX4-202ENST00000448310 ASB18Q6ZVZ8 466 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms