RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 KRT81Q14533 505 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 PRKD1Q15139 912 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 NR6A1Q15406 480 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SEPT7Q16181 437 aaKnown RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 ARHGAP44Q17R89 818 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 PRR30Q53SZ7 412 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 EFHC1Q5JVL4 640 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 DCAF12Q5T6F0 453 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 PIP5KL1Q5T9C9 394 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 C1orf146Q5VVC0 180 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 TCERG1LQ5VWI1 586 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SEL1L3Q68CR1 1132 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 NADSYN1Q6IA69 706 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SPOPLQ6IQ16 392 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 KIAA1161Q6NSJ0 714 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 MSANTD2Q6P1R3 559 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 ADGRD1Q6QNK2 874 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SPNS3Q6ZMD2 512 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 RAPH1Q70E73 1250 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 ARPINQ7Z6K5 226 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 PIM3Q86V86 326 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 GKN2Q86XP6 184 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 TREML1Q86YW5 311 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 UNC45BQ8IWX7 931 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 UNC5BQ8IZJ1 945 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 RBM15BQ8NDT2 890 aaKnown RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 PCDH19Q8TAB3 1148 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 PPP1R14CQ8TAE6 165 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 EFHD2Q96C19 240 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 DNAJC1Q96KC8 554 aaKnown RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 HAUS8Q9BT25 410 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 DHRS4Q9BTZ2 278 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 MFRPQ9BY79 579 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SLC17A9Q9BYT1 436 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 ULBP1Q9BZM6 244 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 KLC2Q9H0B6 622 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SEMA6CQ9H3T2 930 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 LATS2Q9NRM7 1088 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 ARHGEF38Q9NXL2 777 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SLC39A1Q9NY26 324 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 C6orf203Q9P0P8 240 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 PSMC3IPQ9P2W1 217 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 HESX1Q9UBX0 185 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SLC7A8Q9UHI5 535 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SFMBT1Q9UHJ3 866 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SLC25A13Q9UJS0 675 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 DCTN4Q9UJW0 460 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 KCND3Q9UK17 655 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 TLK1Q9UKI8 766 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 FAF1Q9UNN5 650 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 ZFR2Q9UPR6 939 aaKnown RBP6.4□□□□□ -1.38
HDAC6-210ENST00000441703 B3GALT1Q9Y5Z6 326 aa6.4□□□□□ -1.38
HDAC6-210ENST00000441703 SPG11Q96JI7 2443 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 A0A088AWK7 358 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 LOC101059948A0A1B0GTJ6 334 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 A6NCN8 305 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 H0YJX3 145 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 ZW10O43264 779 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 SPINT1O43278 529 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 ITM2AO43736 263 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 DNAJA2O60884 412 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 SORBS2O94875 1100 aaKnown RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 ESRRBO95718 433 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 PAK4O96013 591 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 NR3C1P04150 777 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 C8BP07358 591 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 CD58P19256 250 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 CSTF2P33240 577 aaKnown RBP eCLIP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 PTGER4P35408 488 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 PSMC2P35998 433 aaKnown RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 MARCKSL1P49006 195 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 NUMBP49757 651 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 NEK2P51955 445 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 RPS21P63220 83 aaKnown RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 SLC18A2Q05940 514 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 ABHD18Q0P651 414 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 DLG1Q12959 904 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 PDAP1Q13442 181 aaKnown RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 MESDQ14696 234 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 TCEA2Q15560 299 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 NDUFA5Q16718 116 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 C14orf28Q4W4Y0 310 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 CRTC2Q53ET0 693 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 FSCBQ5H9T9 825 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 DEPDC1Q5TB30 811 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 IZUMO3Q5VZ72 239 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 BSPRYQ5W0U4 402 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 ARHGAP17Q68EM7 881 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 THOC7Q6I9Y2 204 aaKnown RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 DRICH1Q6PGQ1 229 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-210ENST00000441703 FAM129CQ86XR2 697 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 APCDD1Q8J025 514 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 SCML4Q8N228 414 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 LZTR1Q8N653 840 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 METTL25Q8N6Q8 603 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 BANPQ8N9N5 519 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 RCBTB1Q8NDN9 531 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 ADCY4Q8NFM4 1077 aa6.39□□□□□ -1.39
HDAC6-210ENST00000441703 CEP70Q8NHQ1 597 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms