RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 SNAI1O95863 264 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 C8AP07357 584 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SPATA31D3P0C874 917 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 NR2F6P10588 404 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 HNF4AP41235 474 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 AP1S2P56377 157 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 DNAJB13P59910 316 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 CLDN10P78369 228 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 KLF1Q13351 362 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 BLMHQ13867 455 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SLC5A9Q2M3M2 681 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 POM121L1PQ3SYA9 428 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 EMC10Q5UCC4 262 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ZNF57Q68EA5 555 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TXNRD3NBQ6F5E7 133 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SPATA31D4Q6ZUB0 917 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PTCHD4Q6ZW05 846 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 BEND5Q7L4P6 421 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 LDB1Q86U70 411 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ZC3HC1Q86WB0 502 aaKnown RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 GALNT13Q8IUC8 556 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 LIX1Q8N485 282 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 NAT16Q8N8M0 369 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 FAM47BQ8NA70 645 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 COL26A1Q96A83 441 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 CDKN2AIPNLQ96HQ2 116 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TMEM209Q96SK2 561 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 LPIN3Q9BQK8 851 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 C11orf84Q9BUA3 381 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 YTHDF1Q9BYJ9 559 aaKnown RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 XYLT2Q9H1B5 865 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 RNF39Q9H2S5 420 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 RERGLQ9H628 205 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ZNF282Q9UDV7 671 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 OR10H1Q9Y4A9 318 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ERAL1O75616 437 aaKnown RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PGM3O95394 542 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 NUDT14O95848 222 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ALOX5P09917 674 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TCF4P15884 667 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ZNF30P17039 623 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 IGFBP5P24593 272 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 CSKP41240 450 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PSMD8P48556 350 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ACTR3P61158 418 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 RPS14P62263 151 aaKnown RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 BIKQ13323 160 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ATP1A4Q13733 1029 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SIRPB2Q5JXA9 342 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 BRAT1Q6PJG6 821 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 CPNE9Q8IYJ1 553 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ST13P5Q8NFI4 369 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TTLQ8NG68 377 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ADAMTS15Q8TE58 950 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PPM1MQ96MI6 270 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ZNF347Q96SE7 839 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 MIPEPQ99797 713 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SPRTNQ9H040 489 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 NMUR1Q9HB89 426 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TAS2R1Q9NYW7 299 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 RAPGEFL1Q9UHV5 662 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 EIF2B4Q9UI10 523 aaKnown RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 MAFFQ9ULX9 164 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 POMPQ9Y244 141 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TCHHQ07283 1943 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 MYH2Q9UKX2 1941 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3DA0A087WVF3 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3IA0A087WXS9 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3EA0A087X179 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3KA0A087X1G2 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3FA6NER0 549 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3LB9A6J9 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 WWP2O00308 870 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PPEF2O14830 753 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ERN1O75460 977 aaKnown RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PFKMP08237 780 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3HP0C7X1 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 CREB1P16220 341 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SLC7A1P30825 629 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 BUD31P41223 144 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TAS2R41P59536 307 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 MTAPQ13126 283 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3GQ6DHY5 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3CQ6IPX1 549 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PSRC1Q6PGN9 363 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PAOXQ6QHF9 649 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 BNIPLQ7Z465 357 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 TBC1D3Q8IZP1 549 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-202ENST00000441024 CHCHD4Q8N4Q1 142 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 POMGNT2Q8NAT1 580 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SLC13A3Q8WWT9 602 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 BORCS5Q969J3 196 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 SIGLEC10Q96LC7 697 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 RIPOR3Q96MK2 946 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 PLEKHG4BQ96PX9 1271 aa6.31□□□□□ -1.4
CNOT1-202ENST00000441024 ITM2CQ9NQX7 267 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms