RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CTSCP53634 463 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 SQSTM1Q13501 440 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 RPS6KA1Q15418 735 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 FNBP1LQ5T0N5 605 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 TMEM220Q6QAJ8 160 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 MAMDC2Q7Z304 686 aaPredicted RBP12.47□□□□□ -0.41
SGCE-203ENST00000425444 RASGEF1AQ8N9B8 481 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 GALNT11Q8NCW6 608 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 OR13C4Q8NGS5 318 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 APOBEC4Q8WW27 367 aaKnown RBP12.47□□□□□ -0.41
SGCE-203ENST00000425444 DCUN1D1Q96GG9 259 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 FRMD8P1Q9BZ68 369 aaPredicted RBP12.47□□□□□ -0.41
SGCE-203ENST00000425444 B3GNT4Q9C0J1 378 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 EPB41L1Q9H4G0 881 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 CUEDC1Q9NWM3 386 aaPredicted RBP12.47□□□□□ -0.41
SGCE-203ENST00000425444 SCHIP1Q9P0W5 487 aaPredicted RBP12.47□□□□□ -0.41
SGCE-203ENST00000425444 KCTD3Q9Y597 815 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 OR52A4PA6NMU1 304 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 EFCAB7A8K855 629 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 PSMD3O43242 534 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 LIASO43766 372 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 KCNJ13O60928 360 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 POP7O75817 140 aaKnown RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 AP2A1O95782 977 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 RALBP11234 206 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 TYRP1P17643 537 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 AMD1P17707 334 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 XRCC1P18887 633 aaPredicted RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 CA5AP35218 305 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 SLC19A1P41440 591 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 LMAN1P49257 510 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 ZNF140P52738 457 aaPredicted RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 POU6F1Q14863 301 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 DEFB109BQ30KR1 87 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 MEI1Q5TIA1 1274 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 AGAP9Q5VTM2 703 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 DENND5AQ6IQ26 1287 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 TMEM26Q6ZUK4 368 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 C11orf96Q7Z7L8 435 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 LRRC8AQ8IWT6 810 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 CACNA2D3Q8IZS8 1091 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 UBE2Q2Q8WVN8 375 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 ULK4Q96C45 1275 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 ZNF514Q96K75 400 aaPredicted RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 DNAJC1Q96KC8 554 aaKnown RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 ARNT2Q9HBZ2 717 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 PIH1D1Q9NWS0 290 aaKnown RBP12.46□□□□□ -0.41
SGCE-203ENST00000425444 FAM8A1Q9UBU6 413 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 ZNF148Q9UQR1 794 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 TP53TG5Q9Y2B4 290 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 SLC30A1Q9Y6M5 507 aa12.46□□□□□ -0.41
SGCE-203ENST00000425444 SPG11Q96JI7 2443 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 CFAP99D6REC4 459 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 E7EVH7 732 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 CCL22O00626 93 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
SGCE-203ENST00000425444 UBXN7O94888 489 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 DDAH2O95865 285 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 GAS8O95995 478 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 BRAFP15056 766 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 TPH1P17752 444 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 NR1D1P20393 614 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 STIP1P31948 543 aaKnown RBP12.45□□□□□ -0.42
SGCE-203ENST00000425444 MC4RP32245 332 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 XIAPP98170 497 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 DMPKQ09013 629 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 SNX1Q13596 522 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 NFE2L1Q14494 772 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 ZRANB3Q5FWF4 1079 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 KCTD11Q693B1 232 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 ABRAXAS1Q6UWZ7 409 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 WASH2PQ6VEQ5 465 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 SNX20Q7Z614 316 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 PLXDC1Q8IUK5 500 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 RBM12BQ8IXT5 1001 aaKnown RBP12.45□□□□□ -0.42
SGCE-203ENST00000425444 KLHDC8BQ8IXV7 354 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 BEND7Q8N7W2 519 aaPredicted RBP12.45□□□□□ -0.42
SGCE-203ENST00000425444 CCDC89Q8N998 374 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 DNAAF3Q8N9W5 541 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 C1orf54Q8WWF1 131 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 ART4Q93070 314 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 TAAR9Q96RI9 348 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 FAM96AQ9H5X1 160 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 UCK1Q9HA47 277 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 WASH6PQ9NQA3 447 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 IMP3Q9NV31 184 aaKnown RBP12.45□□□□□ -0.42
SGCE-203ENST00000425444 SLC39A1Q9NY26 324 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 ZNF624Q9P2J8 865 aaPredicted RBP12.45□□□□□ -0.42
SGCE-203ENST00000425444 PSMD13Q9UNM6 376 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 WDR37Q9Y2I8 494 aa12.45□□□□□ -0.42
SGCE-203ENST00000425444 DNMT3AQ9Y6K1 912 aaPredicted RBP12.45□□□□□ -0.42
SGCE-203ENST00000425444 TTLL8A6PVC2 850 aa12.44□□□□□ -0.42
SGCE-203ENST00000425444 LDB2O43679 373 aa12.44□□□□□ -0.42
SGCE-203ENST00000425444 FGF3P11487 239 aaPredicted RBP12.44□□□□□ -0.42
SGCE-203ENST00000425444 RAB15P59190 212 aa12.44□□□□□ -0.42
SGCE-203ENST00000425444 CDC20Q12834 499 aa12.44□□□□□ -0.42
SGCE-203ENST00000425444 GPR18Q14330 331 aa12.44□□□□□ -0.42
SGCE-203ENST00000425444 PLCL1Q15111 1095 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms