RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SYNCRIPO60506 623 aaKnown RBP20.59■□□□□ 0.89
GPC1-202ENST00000420138 FGF4P08620 206 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 ENO3P13929 434 aaPredicted RBP20.59■□□□□ 0.89
GPC1-202ENST00000420138 ARHGAP8P85298 464 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 BTKQ06187 659 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 HSPA14Q0VDF9 509 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 LSM12Q3MHD2 195 aaKnown RBP20.59■□□□□ 0.89
GPC1-202ENST00000420138 PLEKHS1Q5SXH7 462 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.59■□□□□ 0.89
GPC1-202ENST00000420138 OR2T3Q8NH03 318 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 CXorf40AQ8TE69 158 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 FAM131CQ96AQ9 280 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 SORCS3Q9UPU3 1222 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 CKAP5Q14008 2032 aa20.59■□□□□ 0.89
GPC1-202ENST00000420138 E9PBE3 544 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 TAPBPO15533 448 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 KLHL41O60662 606 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 SNX2O60749 519 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 RNASEH1O60930 286 aaKnown RBP20.58■□□□□ 0.89
GPC1-202ENST00000420138 GPC4O75487 556 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 ESRRAP11474 423 aaPredicted RBP20.58■□□□□ 0.89
GPC1-202ENST00000420138 COL9A1P20849 921 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 LCP2Q13094 533 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 METTL21CQ5VZV1 264 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 CLEC6AQ6EIG7 209 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 FRA10AC1Q70Z53 315 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 PHYKPLQ8IUZ5 450 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 HDDC3Q8N4P3 179 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 KCNV2Q8TDN2 545 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 AGAP11Q8TF27 550 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 FAR2Q96K12 515 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 BTBD10Q9BSF8 475 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 C8orf33Q9H7E9 229 aaPredicted RBP20.58■□□□□ 0.89
GPC1-202ENST00000420138 RDH14Q9HBH5 336 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 ZNF225Q9UK10 706 aa20.58■□□□□ 0.89
GPC1-202ENST00000420138 PTBP2Q9UKA9 531 aaKnown RBP20.58■□□□□ 0.89
GPC1-202ENST00000420138 A0A1W2PP55 124 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 A8MUI8 341 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 RAD51BO15315 384 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 IL9P15248 144 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 AOC1P19801 751 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 PRLHRP49683 370 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 FOXA1P55317 472 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 PCBP2Q15366 365 aaKnown RBP eCLIP20.57■□□□□ 0.88
GPC1-202ENST00000420138 TBCCQ15814 346 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 ZNF658BQ4V348 819 aaPredicted RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 ZNF776Q68DI1 518 aaPredicted RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 RAET1GQ6H3X3 334 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 TRIM74Q86UV6 250 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 RASGRP3Q8IV61 690 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 CCDC28BQ9BUN5 200 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 MEAF6Q9HAF1 191 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 MID1IP1Q9NPA3 183 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 SEMA4BQ9NPR2 832 aaPredicted RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 EIF2B4Q9UI10 523 aaKnown RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 FIS1Q9Y3D6 152 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 TSPAN6O43657 245 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 NARSO43776 548 aaKnown RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 LILRB5O75023 590 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 SKAP2O75563 359 aaPredicted RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 WFS1O76024 890 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 FTH1P02794 183 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 PRDX3P30048 256 aaKnown RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 GPR1P46091 355 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 INHBCP55103 352 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 TFF2Q03403 129 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 BOP1Q14137 746 aaKnown RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 PUS10Q3MIT2 529 aaKnown RBP20.57■□□□□ 0.88
GPC1-202ENST00000420138 ADGRG6Q86SQ4 1221 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 CLYBLQ8N0X4 340 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 PLA2G15Q8NCC3 412 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 ELMO1Q92556 727 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 SLC6A17Q9H1V8 727 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 GULP1Q9UBP9 304 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 DNAJC15Q9Y5T4 150 aa20.57■□□□□ 0.88
GPC1-202ENST00000420138 LRRK1Q38SD2 2015 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 IGLON5A6NGN9 336 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 TRPC5OSA6NMA1 111 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 QSOX1O00391 747 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 SLCO2B1O94956 709 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 MPC1LP0DKB6 136 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 NAA20P61599 178 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 ASB11Q8WXH4 323 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 TMEM79Q9BSE2 394 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 ZNF385DQ9H6B1 395 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 EPHX3Q9H6B9 360 aa20.56■□□□□ 0.88
GPC1-202ENST00000420138 KPNA5O15131 536 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 KLF8O95600 359 aaPredicted RBP20.55■□□□□ 0.88
GPC1-202ENST00000420138 GUCA1CO95843 209 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 VCLP18206 1134 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 DRD1P21728 446 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 KANK2Q63ZY3 851 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 TMEM220Q6QAJ8 160 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 KIRREL3Q8IZU9 778 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 RHBDF1Q96CC6 855 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 KCNA7Q96RP8 456 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 SLC12A9Q9BXP2 914 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 PDE10AQ9Y233 779 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 GFYI3L273 518 aa20.55■□□□□ 0.88
GPC1-202ENST00000420138 AZIN1O14977 448 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms