RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 LAIR2Q6ISS4 152 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SLC2A7Q6PXP3 512 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 GTF2IRD2Q86UP8 949 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SVOPLQ8N434 492 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 MDGA1Q8NFP4 955 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SOCS4Q8WXH5 440 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 TMBIM1Q969X1 311 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 RMDN1Q96DB5 314 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 FEM1AQ9BSK4 669 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 ALOXE3Q9BYJ1 711 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SMURF2Q9HAU4 748 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SACM1LQ9NTJ5 587 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 DNAJB9Q9UBS3 223 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 GNPTGQ9UJJ9 305 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 B3GNT3Q9Y2A9 372 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SPO11Q9Y5K1 396 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SCN10AQ9Y5Y9 1956 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 NCF1BA6NI72 391 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 GOLGA8CPA6NN73 597 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 NCF1CA8MVU1 366 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 F5H5T6 163 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 H7C0S8 307 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 SYN3O14994 580 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 ANKRD28O15084 1053 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 TBX18O95935 607 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 ESR1P03372 595 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 NCF1P14598 390 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 CR2P20023 1033 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 AGXTP21549 392 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 HOXD9P28356 352 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 PIGAP37287 484 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 PTGER3P43115 390 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 GPR15P49685 360 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 HK3P52790 923 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 PLA2G16P53816 162 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 NKG7Q16617 165 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 CTU2Q2VPK5 515 aaKnown RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 FAM26DQ5JW98 314 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 ZNF362Q5T0B9 420 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 NADSYN1Q6IA69 706 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 CXCL17Q6UXB2 119 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 R3HCC1LQ7Z5L2 792 aaKnown RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 MIB1Q86YT6 1006 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 ZDHHC13Q8IUH4 622 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 C8orf59Q8N0T1 100 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 DTWD1Q8N5C7 304 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 CD200R1Q8TD46 325 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 EEF1AKMT1Q8WVE0 214 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 SDCCAG3Q96C92 435 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 SPATA17Q96L03 361 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 PPP3R2Q96LZ3 170 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 SMIM14Q96QK8 99 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 HBEGFQ99075 208 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 CINPQ9BW66 212 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 ING2Q9H160 280 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 SMPD4Q9NXE4 827 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 USE1Q9NZ43 259 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 UBA2Q9UBT2 640 aaPredicted RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 PSME2Q9UL46 239 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 PAIP2BQ9ULR5 123 aaKnown RBP9.65□□□□□ -0.87
CD44-206ENST00000415148 ERGIC3Q9Y282 383 aa9.65□□□□□ -0.87
CD44-206ENST00000415148 F8W810 466 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 G3V2T6 193 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 LSM1O15116 133 aaKnown RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 NOBOXO60393 691 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 BCL10O95999 233 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 PRLP01236 227 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CRHBPP24387 322 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 GRK4P32298 578 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CDH4P55283 916 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 OXCT1P55809 520 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 FPGSQ05932 587 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 MAD2L1Q13257 205 aaPredicted RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 MEP1AQ16819 746 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 PERM1Q5SV97 790 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 GRAMD4Q6IC98 578 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CYP20A1Q6UW02 462 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 NECAB2Q7Z6G3 386 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 CLEC4FQ8N1N0 589 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 STK40Q8N2I9 435 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 PARP8Q8N3A8 854 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CDYL2Q8N8U2 506 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 SIDT2Q8NBJ9 832 aaKnown RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 ZNF555Q8NEP9 628 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 PJA1Q8NG27 643 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 DNAJB8Q8NHS0 232 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 METTL6Q8TCB7 284 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 GIPC2Q8TF65 315 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 FKBP10Q96AY3 582 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 LINGO1Q96FE5 620 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 ITCHQ96J02 903 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 ZNF583Q96ND8 569 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 SH3GL1Q99961 368 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 YIPF2Q9BWQ6 316 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 OSBPL10Q9BXB5 764 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 ADGRE3Q9BY15 652 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 SPC25Q9HBM1 224 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 DNMT3BQ9UBC3 853 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms