RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SHBGP04278 402 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 ITGA2BP08514 1039 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 F3P13726 295 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 SLC2A4P14672 509 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 GCAP28676 217 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 SKIV2L2P42285 1042 aaKnown RBP16.29■□□□□ 0.2
SUMO1-208ENST00000409627 SERPINB9P50453 376 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 LIMK1P53667 647 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 CDKN2DP55273 166 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 TIAL1Q01085 375 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■□□ 16
SUMO1-208ENST00000409627 POU4F1Q01851 419 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 GBX1Q14549 363 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 TTLL9Q3SXZ7 439 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 STPG1Q5TH74 334 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 ABRAXAS1Q6UWZ7 409 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 TAOK1Q7L7X3 1001 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 CNPY4Q8N129 248 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 ZBTB2Q8N680 514 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 LILRA3Q8N6C8 439 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-208ENST00000409627 FAM46DQ8NEK8 389 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 ACVR1CQ8NER5 493 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 CD200R1Q8TD46 325 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 DCAKDQ8WVC6 231 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 GLMNQ92990 594 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 TMEM159Q96B96 161 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 MRRFQ96E11 262 aaKnown RBP16.29■□□□□ 0.2
SUMO1-208ENST00000409627 GPR21Q99679 349 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 DPEP2Q9H4A9 486 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 SARS2Q9NP81 518 aaKnown RBP16.29■□□□□ 0.2
SUMO1-208ENST00000409627 GALPQ9UBC7 116 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 FAM8A1Q9UBU6 413 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 SLC24A2Q9UI40 661 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 CDYLQ9Y232 598 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 MTO1Q9Y2Z2 717 aaKnown RBP16.29■□□□□ 0.2
SUMO1-208ENST00000409627 DHRS7Q9Y394 339 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 C4orf47A7E2U8 309 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 SNX2O60749 519 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 SLCO2B1O94956 709 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 CD59P13987 128 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 CNTFP26441 200 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 ATP5DP30049 168 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 GRK6P43250 576 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 PREPP48147 710 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 HSPA14Q0VDF9 509 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 UAP1L1Q3KQV9 507 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
SUMO1-208ENST00000409627 ZCCHC8Q6NZY4 707 aaKnown RBP16.28■□□□□ 0.2
SUMO1-208ENST00000409627 OGFOD3Q6PK18 319 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 ADGRD1Q6QNK2 874 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 NAPRTQ6XQN6 538 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 SLC22A15Q8IZD6 547 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 SIDT2Q8NBJ9 832 aaKnown RBP16.28■□□□□ 0.2
SUMO1-208ENST00000409627 GIMAP7Q8NHV1 300 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 ZDHHC1Q8WTX9 485 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 INPP5DQ92835 1189 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 FAM136AQ96C01 138 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 TSPAN17Q96FV3 270 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 OLFM1Q99784 485 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 OR52A5Q9H2C5 316 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 POPDC3Q9HBV1 291 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 PRDM8Q9NQV8 689 aa16.28■□□□□ 0.2
SUMO1-208ENST00000409627 TRMT6Q9UJA5 497 aaKnown RBP16.28■□□□□ 0.2
SUMO1-208ENST00000409627 HMX2A2RU54 273 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 OR5K4A6NMS3 321 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 PDZK1P1A8MUH7 402 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 B4DGG1 531 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 EIF3FO00303 357 aaPredicted RBP16.27■□□□□ 0.2
SUMO1-208ENST00000409627 TRIM38O00635 465 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 TCEA3O75764 348 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 KRT38O76015 456 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 EML2O95834 649 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 SLC35G4P0C7Q5 338 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 BRAFP15056 766 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 RPL10P27635 214 aaKnown RBP16.27■□□□□ 0.2
SUMO1-208ENST00000409627 PDHA2P29803 388 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 HALP42357 657 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 SLC12A2P55011 1212 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 TAS2R39P59534 338 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
SUMO1-208ENST00000409627 USP10Q14694 798 aaKnown RBP16.27■□□□□ 0.2
SUMO1-208ENST00000409627 SEPT7Q16181 437 aaKnown RBP16.27■□□□□ 0.2
SUMO1-208ENST00000409627 IYDQ6PHW0 289 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 PDZD3Q86UT5 571 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 PIM3Q86V86 326 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 TDRPQ86YL5 185 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 NAGSQ8N159 534 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 EID2Q8N6I1 236 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 FAM181AQ8N9Y4 354 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 GPR156Q8NFN8 814 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 RMDN2Q96LZ7 410 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 SLC30A3Q99726 388 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 WWP1Q9H0M0 922 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 ARGLU1Q9NWB6 273 aaPredicted RBP16.27■□□□□ 0.2
SUMO1-208ENST00000409627 PSMC3IPQ9P2W1 217 aaPredicted RBP16.27■□□□□ 0.2
SUMO1-208ENST00000409627 SLC39A10Q9ULF5 831 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 WDR37Q9Y2I8 494 aa16.27■□□□□ 0.2
SUMO1-208ENST00000409627 ARID1BQ8NFD5 2236 aaPredicted RBP16.27■□□□□ 0.19
SUMO1-208ENST00000409627 ASCC3Q8N3C0 2202 aaKnown RBP16.26■□□□□ 0.19
SUMO1-208ENST00000409627 ZFHX2Q9C0A1 2572 aaPredicted RBP16.26■□□□□ 0.19
SUMO1-208ENST00000409627 KIR2DS5A0A0G2JLQ3 304 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms