RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 DCLRE1BQ9H816 532 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 FBRSL1Q9HCM7 1045 aaKnown RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 THAP10Q9P2Z0 257 aaPredicted RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 KAT7O95251 611 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 C8GP07360 202 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 IL12RB1P42701 662 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 BOP1Q14137 746 aaKnown RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 PTK2BQ14289 1009 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 AGKQ53H12 422 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 CDKL4Q5MAI5 379 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 METTL2BQ6P1Q9 378 aaKnown RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 GK5Q6ZS86 529 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 OR52B6Q8NGF0 335 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 UBTD2Q8WUN7 234 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 SKA2Q8WVK7 121 aaPredicted RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 STMN2Q93045 179 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 DTD2Q96FN9 168 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 CCT7Q99832 543 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 TRIM54Q9BYV2 358 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 CD244Q9BZW8 370 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 POLG2Q9UHN1 485 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 L3MBTL1Q9Y468 752 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 ANGPTL3Q9Y5C1 460 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 C1QTNF3-AMACRE9PGA6 284 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 SPINT1O43278 529 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 CCNT2O60583 730 aaKnown RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 OTCP00480 354 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ANXA5P08758 320 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ENO2P09104 434 aaPredicted RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 LAMP2P13473 410 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ADRB3P13945 408 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 GDI1P31150 447 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ERVPABLB-1P60509 514 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 STX5Q13190 355 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ADAM15Q13444 863 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ART3Q13508 389 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 C1orf146Q5VVC0 180 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 PGM2L1Q6PCE3 622 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 NUDT18Q6ZVK8 323 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 UBE2R2Q712K3 238 aaPredicted RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 CYP2U1Q7Z449 544 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 PHYKPLQ8IUZ5 450 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 DSELQ8IZU8 1212 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ENDOVQ8N8Q3 282 aaKnown RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 CDYL2Q8N8U2 506 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ELMO1Q92556 727 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 IPPKQ9H8X2 491 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 OPTCQ9UBM4 332 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 DOCK8Q8NF50 2099 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 OR7A17O14581 309 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 AREL1O15033 823 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 EPHX1P07099 455 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ALDOCP09972 364 aaKnown RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 GRIA2P42262 883 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 RPIAP49247 311 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 GRB7Q14451 532 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 KIF19Q2TAC6 998 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 ZNF648Q5T619 568 aaPredicted RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 PARM1Q6UWI2 310 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 RIPOR1Q6ZS17 1223 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 HMGCLL1Q8TB92 370 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 CDK15Q96Q40 435 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 TMEM79Q9BSE2 394 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 MRPL1Q9BYD6 325 aaKnown RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 CCDC167Q9P0B6 97 aa18.61■□□□□ 0.57
USP39-202ENST00000409025 NKX1-2Q9UD57 310 aaPredicted RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 PRPF19Q9UMS4 504 aaKnown RBP18.61■□□□□ 0.57
USP39-202ENST00000409025 PABPN1LA6NDY0 278 aaKnown RBP18.6■□□□□ 0.57
USP39-202ENST00000409025 OR2AG2A6NM03 316 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 H0Y3Z8 333 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 SGTAO43765 313 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 APODP05090 189 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 HGFP14210 728 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 ACADVLP49748 655 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 CCNG1P51959 295 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 IRX1P78414 480 aaPredicted RBP18.6■□□□□ 0.57
USP39-202ENST00000409025 CDKL1Q00532 357 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 ITPRIPL2Q3MIP1 535 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 LETMD1Q6P1Q0 360 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 NEK10Q6ZWH5 1172 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 ERN2Q76MJ5 926 aaKnown RBP18.6■□□□□ 0.57
USP39-202ENST00000409025 MMAAQ8IVH4 418 aaKnown RBP18.6■□□□□ 0.57
USP39-202ENST00000409025 FBXW8Q8N3Y1 598 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 CHCHD4Q8N4Q1 142 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 CFAP61Q8NHU2 1237 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 METTL6Q8TCB7 284 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 ASZ1Q8WWH4 475 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 SLC12A9Q9BXP2 914 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 PARVBQ9HBI1 364 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 PRSS16Q9NQE7 514 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 RIC8BQ9NVN3 520 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 ARL15Q9NXU5 204 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 GIMAP2Q9UG22 337 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 PDE10AQ9Y233 779 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 COQ6Q9Y2Z9 468 aa18.6■□□□□ 0.57
USP39-202ENST00000409025 K7EPI3 171 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 PLK4O00444 970 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 SLC16A5O15375 505 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 PSMG1O95456 288 aa18.59■□□□□ 0.57
USP39-202ENST00000409025 SNRPB2P08579 225 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms