RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PDK1Q15118 436 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 AMZ1Q400G9 498 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 PYCR3Q53H96 274 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF362Q5T0B9 420 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 HENMT1Q5T8I9 393 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 NKAIN2Q5VXU1 208 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 RAD9BQ6WBX8 426 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF765Q7L2R6 523 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 VSIG1Q86XK7 387 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF761Q86XN6 746 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 NAGSQ8N159 534 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ARL14Q8N4G2 192 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CCDC63Q8NA47 563 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GSDMBQ8TAX9 411 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF578Q96N58 590 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 UQCC2Q9BRT2 126 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SIKE1Q9BRV8 207 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 HGH1Q9BTY7 390 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 MLPHQ9BV36 600 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 HEMGNQ9BXL5 484 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 TPK1Q9H3S4 243 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SEMA6CQ9H3T2 930 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CPNE5Q9HCH3 593 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 TRNAU1APQ9NX07 287 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 EURLQ9NYK6 297 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 AHCTF1Q8WYP5 2266 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CTAGE15A4D2H0 777 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 C5orf60A6NFR6 353 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 AGPSO00116 658 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 PDE2AO00408 941 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 PPM1DO15297 605 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 RRP8O43159 456 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 PSTPIP1O43586 416 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 DNAJC6O75061 913 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 PMPCBO75439 489 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 TNFSF15O95150 251 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GSTT2P0CG29 244 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GSTT2BP0CG30 244 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CTAGE8P0CG41 777 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ITIH1P19827 911 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ACTR1BP42025 376 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CHRNA4P43681 627 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 HADHBP55084 474 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 PCBP4P57723 403 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ACTR1AP61163 376 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 RPL26P61254 145 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ILF3Q12906 894 aaKnown RBP eCLIP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 P3H1Q32P28 736 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 TEX44Q53QW1 395 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 AADACL2Q6P093 401 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 TMEM154Q6P9G4 183 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF574Q6ZN55 896 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 LRRC69Q6ZNQ3 347 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CTAGE6Q86UF2 777 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 NT5DC3Q86UY8 548 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZC3H18Q86VM9 953 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CTAGE4Q8IX94 777 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 NRSN1Q8IZ57 195 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GOLM1Q8NBJ4 401 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GPR26Q8NDV2 337 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF248Q8NDW4 579 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 FCRL3Q96P31 734 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SRPK1Q96SB4 655 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 PRPF18Q99633 342 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 FAM118BQ9BPY3 351 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 NUDT22Q9BRQ3 303 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 FAM167BQ9BTA0 163 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GSDMCQ9BYG8 508 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 LACRTQ9GZZ8 138 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SLC25A51Q9H1U9 297 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GBA3Q9H227 469 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GLOD4Q9HC38 313 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 MKL2Q9ULH7 1088 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 RPL26L1Q9UNX3 145 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SETXQ7Z333 2677 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CDRT15L2A8MXV6 281 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 H0YC42 278 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 MATN2O00339 956 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 GPR39O43194 453 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 NUDT21O43809 227 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 ASMTLO95671 621 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 PRB1P04280 392 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 ITGA2BP08514 1039 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 NFKB1P19838 968 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CD9P21926 228 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CA4P22748 312 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 MPSTP25325 297 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CA5AP35218 305 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 UGT1A5P35504 534 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 ETV5P41161 510 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 TPD52P55327 224 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CXADRP78310 365 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 HPCAP84074 193 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CFHR1Q03591 330 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CDK18Q07002 472 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 HSPA14Q0VDF9 509 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 SRSF6Q13247 344 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 E2F2Q14209 437 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms