RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
PCNX4-204ENST00000406949 TMTC4Q5T4D3 741 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 CCSAPQ6IQ19 270 aaPredicted RBP11.72□□□□□ -0.53
PCNX4-204ENST00000406949 SPESP1Q6UW49 350 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 AQP12AQ8IXF9 295 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 ELMOD1Q8N336 334 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 LIX1Q8N485 282 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 ZBTB2Q8N680 514 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 OR2T12Q8NG77 320 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 BIRC8Q96P09 236 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 OR52E6Q96RD3 313 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 YME1L1Q96TA2 773 aa11.72□□□□□ -0.53
PCNX4-204ENST00000406949 RSL24D1Q9UHA3 163 aaKnown RBP11.72□□□□□ -0.53
PCNX4-204ENST00000406949 A0A1W2PQ67 120 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 FAM234BA2RU67 622 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 STX16O14662 325 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 RPS17P08708 135 aaKnown RBP11.71□□□□□ -0.53
PCNX4-204ENST00000406949 HK3P52790 923 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 CAP1Q01518 475 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 MERTKQ12866 999 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 CYHR1Q6ZMK1 362 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 KLHDC8BQ8IXV7 354 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 FIBCD1Q8N539 461 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 TRPV3Q8NET8 790 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 OR2T11Q8NH01 316 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 SLCO4A1Q96BD0 722 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 PPP3R2Q96LZ3 170 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 ATG10Q9H0Y0 220 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 CCM2LQ9NUG4 571 aaPredicted RBP11.71□□□□□ -0.53
PCNX4-204ENST00000406949 SMOXQ9NWM0 555 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 PCDHB1Q9Y5F3 818 aa11.71□□□□□ -0.53
PCNX4-204ENST00000406949 TCRBV3S1A0A5B6 114 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 IGLV3-27P01718 113 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 KRT6AP02538 564 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 KRT6BP04259 564 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 ANXA5P08758 320 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 SMIM18P0DKX4 95 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 EFNA1P20827 205 aaPredicted RBP11.71□□□□□ -0.54
PCNX4-204ENST00000406949 RPS9P46781 194 aaKnown RBP11.71□□□□□ -0.54
PCNX4-204ENST00000406949 TM4SF4P48230 202 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 KRT6CP48668 564 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 CSRP3P50461 194 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 NEK2P51955 445 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 AAK1Q2M2I8 961 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 HMBOX1Q6NT76 420 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 CERS6Q6ZMG9 384 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 GALNT7Q86SF2 657 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 TSPAN33Q86UF1 283 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 TMEM126BQ8IUX1 230 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 IGSF21Q96ID5 467 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 TRIB3Q96RU7 358 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 COPS8Q99627 209 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 TLR9Q9NR96 1032 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 FARSBQ9NSD9 589 aaKnown RBP11.71□□□□□ -0.54
PCNX4-204ENST00000406949 RNF11Q9Y3C5 154 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 GPR45Q9Y5Y3 372 aa11.71□□□□□ -0.54
PCNX4-204ENST00000406949 NUP214P35658 2090 aaPredicted RBP11.71□□□□□ -0.54
PCNX4-204ENST00000406949 GPIP06744 558 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 TNK2Q07912 1038 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 LAPTM5Q13571 262 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 DEFB115Q30KQ5 88 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 RFTN2Q52LD8 501 aaPredicted RBP11.7□□□□□ -0.54
PCNX4-204ENST00000406949 GPR107Q5VW38 600 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 ZDHHC13Q8IUH4 622 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 TBC1D21Q8IYX1 336 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 CMTM8Q8IZV2 173 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 SFRP1Q8N474 314 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 TMEM199Q8N511 208 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 MINDY1Q8N5J2 469 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 TNIP2Q8NFZ5 429 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 WFDC5Q8TCV5 224 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 BIRC7Q96CA5 298 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 MED8Q96G25 268 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 NSMCE3Q96MG7 304 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 PLEKHG4BQ96PX9 1271 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 LRRC3Q9BY71 257 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 CD300AQ9UGN4 299 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 A0A1W2PRU2 124 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 HS6ST1O60243 411 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 STK16O75716 305 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 WDR47O94967 919 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 FKBP9O95302 570 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 CPSF4O95639 269 aaKnown RBP11.7□□□□□ -0.54
PCNX4-204ENST00000406949 ANXA6P08133 673 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 MAP4P27816 1152 aaKnown RBP11.7□□□□□ -0.54
PCNX4-204ENST00000406949 YBX1P67809 324 aaKnown RBP11.7□□□□□ -0.54
PCNX4-204ENST00000406949 ACVR1Q04771 509 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 MRPL58Q14197 206 aaKnown RBP11.7□□□□□ -0.54
PCNX4-204ENST00000406949 PHKG1Q16816 387 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 FKBP9P1Q75LS8 142 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 METTL25Q8N6Q8 603 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 NAT16Q8N8M0 369 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 SNX19Q92543 992 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 AURKBQ96GD4 344 aaPredicted RBP11.7□□□□□ -0.54
PCNX4-204ENST00000406949 CLSTN3Q9BQT9 956 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 LRTM1Q9HBL6 345 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 ABCB8Q9NUT2 735 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 RHBDL2Q9NX52 303 aa11.7□□□□□ -0.54
PCNX4-204ENST00000406949 SMPD3Q9NY59 655 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms