RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 DOLKQ9UPQ8 538 aa24.98■■□□□ 1.59
U2AF1-203ENST00000398137 IGSF10Q6WRI0 2623 aa24.98■■□□□ 1.59
U2AF1-203ENST00000398137 PTPRQQ9UMZ3 2332 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 NOBOXO60393 691 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 NDUFS3O75489 264 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 ZNF7P17097 686 aaPredicted RBP24.97■■□□□ 1.59
U2AF1-203ENST00000398137 NSG1P42857 185 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 ABCG1P45844 678 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 LRP8Q14114 963 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 BCL7AQ4VC05 210 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 OGFOD3Q6PK18 319 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 SLC30A9Q6PML9 568 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 GSPT2Q8IYD1 628 aaKnown RBP24.97■■□□□ 1.59
U2AF1-203ENST00000398137 CALML6Q8TD86 181 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 GPBAR1Q8TDU6 330 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 CCDC74AQ96AQ1 378 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 ZNF514Q96K75 400 aaPredicted RBP24.97■■□□□ 1.59
U2AF1-203ENST00000398137 ANKZF1Q9H8Y5 726 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 POLR1BQ9H9Y6 1135 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 SLC17A6Q9P2U8 582 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 SLC23A2Q9UGH3 650 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 SATB2Q9UPW6 733 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 DNAJC16Q9Y2G8 782 aa24.97■■□□□ 1.59
U2AF1-203ENST00000398137 A0A1W2PQM1 296 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 TCEA3O75764 348 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 SSTR1P30872 391 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 ACTR1BP42025 376 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 PRLHRP49683 370 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 ACTR1AP61163 376 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 CTBP1Q13363 440 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 RBM44Q6ZP01 1051 aaKnown RBP24.96■■□□□ 1.59
U2AF1-203ENST00000398137 CEP128Q6ZU80 1094 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 C11orf96Q7Z7L8 435 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 TIMM29Q9BSF4 260 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 KLC4Q9NSK0 619 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 FBXO5Q9UKT4 447 aa24.96■■□□□ 1.59
U2AF1-203ENST00000398137 UBA6A0AVT1 1052 aaPredicted RBP24.95■■□□□ 1.58
U2AF1-203ENST00000398137 GPX6P59796 221 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 MPP1Q00013 466 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 FRG1Q14331 258 aaKnown RBP24.95■■□□□ 1.58
U2AF1-203ENST00000398137 C3orf38Q5JPI3 329 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 RNF187Q5TA31 235 aaPredicted RBP24.95■■□□□ 1.58
U2AF1-203ENST00000398137 LMNTD2Q8IXW0 634 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 SCG3Q8WXD2 468 aaKnown RBP24.95■■□□□ 1.58
U2AF1-203ENST00000398137 TCF12Q99081 682 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 OSGEPL1Q9H4B0 414 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 PRORYQ9H606 182 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 RRAGDQ9NQL2 400 aaPredicted RBP24.95■■□□□ 1.58
U2AF1-203ENST00000398137 FBXO6Q9NRD1 293 aaPredicted RBP24.95■■□□□ 1.58
U2AF1-203ENST00000398137 TAAR2Q9P1P5 351 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 FAM8A1Q9UBU6 413 aa24.95■■□□□ 1.58
U2AF1-203ENST00000398137 PRMT5O14744 637 aaPredicted RBP24.94■■□□□ 1.58
U2AF1-203ENST00000398137 PFDN6O15212 129 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 POP7O75817 140 aaKnown RBP24.94■■□□□ 1.58
U2AF1-203ENST00000398137 AP2A2O94973 939 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 EIF3BP55884 814 aaKnown RBP24.94■■□□□ 1.58
U2AF1-203ENST00000398137 TUBB4BP68371 445 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 CCL7P80098 99 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 MGAT5Q09328 741 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 ZNF789Q5FWF6 425 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 IGF2-ASQ6U949 168 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 B3GNT8Q7Z7M8 397 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 LPGAT1Q92604 370 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 ZNF578Q96N58 590 aaPredicted RBP24.94■■□□□ 1.58
U2AF1-203ENST00000398137 TSPYL1Q9H0U9 437 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 VPS37BQ9H9H4 285 aa24.94■■□□□ 1.58
U2AF1-203ENST00000398137 B4DGG1 531 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 S1PR4O95977 384 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 MYBL2P10244 700 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 TLE3Q04726 772 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 AMZ2Q86W34 360 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 CNTN4Q8IWV2 1026 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 SPACA3Q8IXA5 215 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 FAM46DQ8NEK8 389 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 UBXN4Q92575 508 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 P2RY12Q9H244 342 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 LRRC4CQ9HCJ2 640 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 SPATS2LQ9NUQ6 558 aaKnown RBP24.93■■□□□ 1.58
U2AF1-203ENST00000398137 INTS10Q9NVR2 710 aaKnown RBP24.93■■□□□ 1.58
U2AF1-203ENST00000398137 MOCS1Q9NZB8 636 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 NINJ2Q9NZG7 142 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 CRYL1Q9Y2S2 319 aa24.93■■□□□ 1.58
U2AF1-203ENST00000398137 UNC13CQ8NB66 2214 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 TCRBV9S1A1TA0A576 114 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 RRP8O43159 456 aaKnown RBP24.92■■□□□ 1.58
U2AF1-203ENST00000398137 SNX2O60749 519 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 GSTA2P09210 222 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 OR56A5P0C7T3 313 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 VCLP18206 1134 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 SPIDRQ14159 915 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 UBAP2Q5T6F2 1119 aaKnown RBP24.92■■□□□ 1.58
U2AF1-203ENST00000398137 TEDDM1Q5T9Z0 273 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 C3orf62Q6ZUJ4 267 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 LSMEM2Q8N112 164 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 C2CD4AQ8NCU7 369 aaPredicted RBP24.92■■□□□ 1.58
U2AF1-203ENST00000398137 WDR48Q8TAF3 677 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 GABPB2Q8TAK5 448 aaPredicted RBP24.92■■□□□ 1.58
U2AF1-203ENST00000398137 LKAAEAR1Q8TD35 194 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 GRAMD1AQ96CP6 724 aa24.92■■□□□ 1.58
U2AF1-203ENST00000398137 SLC46A1Q96NT5 459 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms