RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GALNT3Q14435 633 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 HABP4Q5JVS0 413 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 SDHAF4Q5VUM1 108 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 UBE2UQ5VVX9 321 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 RSBN1Q5VWQ0 802 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 CCDC81Q6ZN84 652 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 ADCK1Q86TW2 530 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 PGBD5Q8N414 524 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 FBXO39Q8N4B4 442 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 OR7A2PQ8NGA2 310 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 RNF145Q96MT1 663 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 SPC25Q9HBM1 224 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 RNF112Q9ULX5 631 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 ICMTO60725 284 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 CYBBP04839 570 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 TSPY1Q01534 308 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 TAF2Q6P1X5 1199 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 R3HCC1LQ7Z5L2 792 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 SCN4BQ8IWT1 228 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 TRPV1Q8NER1 839 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 PHF10Q8WUB8 498 aaKnown RBP15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 SOCS4Q8WXH5 440 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 BIRC7Q96CA5 298 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 SNX18Q96RF0 628 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 ADNPQ9H2P0 1102 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 HPS4Q9NQG7 708 aa15.76■□□□□ 0.11
CHMP1A-201ENST00000397901 CCDC154A6NI56 674 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 F8W810 466 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 MAN1A2O60476 641 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 C1RP00736 705 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 OR4Q2P0C623 313 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 SHMT2P34897 504 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ALDH7A1P49419 539 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 AGTR2P50052 363 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 SLC13A2Q13183 592 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 RCAN2Q14206 197 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 TSNQ15631 228 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 TRIM71Q2Q1W2 868 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 RALGPS2Q86X27 583 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 FAM20CQ8IXL6 584 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 TBC1D21Q8IYX1 336 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 DCBLD1Q8N8Z6 715 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ARRDC2Q8TBH0 407 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ATL1Q8WXF7 558 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 HDAC2Q92769 488 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 DACH2Q96NX9 599 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ACOX2Q99424 681 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 CHID1Q9BWS9 393 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 DGCR6LQ9BY27 220 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 SYCE1LA8MT33 242 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 EVPLLA8MZ36 301 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 TEX28O15482 410 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 XYLBO75191 536 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 RHOBTB1O94844 696 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 KCNK2O95069 426 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 AKR1A1P14550 325 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 PRKACBP22694 351 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 HRH2P25021 359 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ZFP36L2P47974 494 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 GABARAPL2P60520 117 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 MRPS6P82932 125 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 COQ5Q5HYK3 327 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 MRNIPQ6NTE8 343 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 PAQR3Q6TCH7 311 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 THAP5Q7Z6K1 395 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 CIR1Q86X95 450 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 PTRH1Q86Y79 214 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 LYSMD2Q8IV50 215 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ESAMQ96AP7 390 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 PKMYT1Q99640 499 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 SEMA3CQ99985 751 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ZNF639Q9UID6 485 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 SCN10AQ9Y5Y9 1956 aa15.75■□□□□ 0.11
CHMP1A-201ENST00000397901 ENPP3O14638 875 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 DUSP11O75319 330 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 ECI2O75521 394 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 UPK1BO75841 260 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 CCNKO75909 580 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 GABARAPO95166 117 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 DLGAP3O95886 979 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 CTGFP29279 349 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 FMO4P31512 558 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 IFNA8P32881 189 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 GRK3P35626 688 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 P2RX3P56373 397 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 OR4D2P58180 307 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 YWHAHQ04917 246 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 OVOS1Q6IE37 1185 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 BEND5Q7L4P6 421 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 SPATA2LQ8IUW3 424 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 UMODL1-AS1Q8N2C9 162 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 RHOXF1Q8NHV9 184 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 PSMA8Q8TAA3 256 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 AARSD1Q9BTE6 412 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 TFB2MQ9H5Q4 396 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 NECTIN3Q9NQS3 549 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 CATSPERZQ9NTU4 200 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 AIG1Q9NVV5 245 aa15.74■□□□□ 0.11
CHMP1A-201ENST00000397901 MAGED1Q9Y5V3 778 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms