RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 KCTD14Q9BQ13 255 aaPredicted RBP18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 C17orf80Q9BSJ5 609 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CLPBQ9H078 707 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ASB8Q9H765 288 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RIC8BQ9NVN3 520 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ZMYM5Q9UJ78 669 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 STOML2Q9UJZ1 356 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 C1orf232A0A0U1RR37 186 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 OR7A17O14581 309 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TRIM16O95361 564 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CLDN7O95471 211 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 IL10P22301 178 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PLIN5Q00G26 463 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NANOGP8Q6NSW7 305 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PPP4R4Q6NUP7 873 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CMTR2Q8IYT2 770 aaKnown RBP18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ADGRG5Q8IZF4 528 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NANOGQ9H9S0 305 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ZFYVE1Q9HBF4 777 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NUDT4Q9NZJ9 180 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CLEC4EQ9ULY5 219 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CPQQ9Y646 472 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 V9GYQ6 96 aa18.07■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PLXNA4Q9HCM2 1894 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 KANSL1LA0AUZ9 987 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 FFAR2O15552 330 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GREM1O60565 184 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SOD2P04179 222 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RPL10P27635 214 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GDF5P43026 501 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 HSPA7P48741 367 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 FOXM1Q08050 763 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NHSL2Q5HYW2 709 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 KRT80Q6KB66 452 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ZNF783Q6ZMS7 281 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PATL1Q86TB9 770 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 HJURPQ8NCD3 748 aaPredicted RBP18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 APOL5Q9BWW9 433 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 AGPAT4Q9NRZ5 378 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 LEF1Q9UJU2 399 aaPredicted RBP18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TYW5A2RUC4 315 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 MT-ND1P03886 318 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 G6PDP11413 515 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NAT1P18440 290 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PIK3CGP48736 1102 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NAA20P61599 178 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GRIK2Q13002 908 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GTF2H2Q13888 395 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PDCD4Q53EL6 469 aaKnown RBP18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GTF2H2CQ6P1K8 395 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DDI1Q8WTU0 396 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TSPEARQ8WU66 669 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TNKS2Q9H2K2 1166 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 IPPKQ9H8X2 491 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ITGB1BP2Q9UKP3 347 aa18.06■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PIKFYVEQ9Y2I7 2098 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SERPINB7O75635 380 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SLC25A14O95258 325 aaPredicted RBP18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ZNF7P17097 686 aaPredicted RBP18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CA8P35219 290 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ABRAXAS2Q15018 415 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NR6A1Q15406 480 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TPGS2Q68CL5 300 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ADAMTSL2Q86TH1 951 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 IL26Q9NPH9 171 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ELOVL2Q9NXB9 296 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PCDH10Q9P2E7 1040 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PCDHB1Q9Y5F3 818 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GNAO1P09471 354 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 FASP25445 335 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NFKBIAP25963 317 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 KCTD21Q4G0X4 260 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RFTN2Q52LD8 501 aaPredicted RBP18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 Q6ZNX1 250 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DCAF4L2Q8NA75 395 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GFM2Q969S9 779 aaKnown RBP18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DNMT3BQ9UBC3 853 aaKnown RBP18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 OAZ3Q9UMX2 235 aa18.05■□□□□ 0.48
CHRFAM7A-202ENST00000397827 DLGAP1O14490 977 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GSTT2P0CG29 244 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 GSTT2BP0CG30 244 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 BCL2L1Q07817 233 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PRKG2Q13237 762 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 NFATC2Q13469 925 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PCBP2Q15366 365 aaKnown RBP eCLIP18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PHKG1Q16816 387 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 CERS6Q6ZMG9 384 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TPGS1Q6ZTW0 290 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 RALGPS2Q86X27 583 aaPredicted RBP18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 FAM47BQ8NA70 645 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TSPAN14Q8NG11 270 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 PDLIM5Q96HC4 596 aaKnown RBP18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 TMEM169Q96HH4 297 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ACTL8Q9H568 366 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 OLAHQ9NV23 265 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ZIM2Q9NZV7 527 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 ST14Q9Y5Y6 855 aa18.04■□□□□ 0.48
CHRFAM7A-202ENST00000397827 FAM234BA2RU67 622 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms