RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CFAP61Q8NHU2 1237 aa20.79■□□□□ 0.92
CPNE1-204ENST00000397443 WDR92Q96MX6 357 aa20.79■□□□□ 0.92
CPNE1-204ENST00000397443 CAAP1Q9H8G2 361 aa20.79■□□□□ 0.92
CPNE1-204ENST00000397443 CARS2Q9HA77 564 aaKnown RBP20.79■□□□□ 0.92
CPNE1-204ENST00000397443 ACSS2Q9NR19 701 aa20.79■□□□□ 0.92
CPNE1-204ENST00000397443 RNF112Q9ULX5 631 aa20.79■□□□□ 0.92
CPNE1-204ENST00000397443 CDYLQ9Y232 598 aa20.79■□□□□ 0.92
CPNE1-204ENST00000397443 PLEKHM1Q9Y4G2 1056 aa20.79■□□□□ 0.92
CPNE1-204ENST00000397443 PRSS38A1L453 326 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 NCF1BA6NI72 391 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-204ENST00000397443 NCF1CA8MVU1 366 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-204ENST00000397443 G3V2L1 256 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 MYL2P10916 166 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 NCF1P14598 390 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-204ENST00000397443 ALDH3A1P30838 453 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 ARHGAP8P85298 464 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 FAM83HQ6ZRV2 1179 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-204ENST00000397443 ZCCHC23Q6ZST2 131 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 ABI3BPQ7Z7G0 1075 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 AMZ2Q86W34 360 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 DTWD2Q8NBA8 298 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 OR1E3Q8WZA6 343 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 KIAA1191Q96A73 305 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 ADAMTS6Q9UKP5 1117 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 THADAQ6YHU6 1953 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 BPGMP07738 259 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 THEGLP0DJG4 465 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 TDGF1P13385 188 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 BGNP21810 368 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 CD27P26842 260 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 RABIFP47224 123 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 SLC22A18ASQ8N1D0 253 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 OSGEPL1Q9H4B0 414 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 TFB2MQ9H5Q4 396 aaKnown RBP20.78■□□□□ 0.92
CPNE1-204ENST00000397443 COG4Q9H9E3 785 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 PLXND1Q9Y4D7 1925 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 WDFY4Q6ZS81 3184 aa20.78■□□□□ 0.92
CPNE1-204ENST00000397443 MGAT4DA6NG13 374 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 SUPT3HB4E1H0 165 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 UBXN8O00124 270 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 KMOO15229 486 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 SUPT3HO75486 399 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 GPC4O75487 556 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 CBSLP0DN79 551 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 KELP23276 732 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 HOXA6P31267 233 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 CBSP35520 551 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 YPEL5P62699 121 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 ABRQ12979 859 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 CYHR1Q6ZMK1 362 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 OR2L2Q8NH16 312 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 PPP1R14CQ8TAE6 165 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 STAG3L4Q8TBR4 150 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 CKAP2Q8WWK9 683 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 MOCOSQ96EN8 888 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 LINC00615Q96LM1 132 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-204ENST00000397443 KLC4Q9NSK0 619 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 KLHL42Q9P2K6 505 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 KLQ9UEF7 1012 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 PNMA8BQ9ULN7 279 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-204ENST00000397443 PSMD13Q9UNM6 376 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 KCNK6Q9Y257 313 aa20.77■□□□□ 0.92
CPNE1-204ENST00000397443 SLC5A10A0PJK1 596 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 TARM1B6A8C7 271 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 NUDT1P36639 197 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 GBX1Q14549 363 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 CHI3L2Q15782 390 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 PYCR3Q53H96 274 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 ZNF542PQ5EBM4 170 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 FBXO48Q5FWF7 155 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 ZYG11AQ6WRX3 759 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 FRA10AC1Q70Z53 315 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 FBXL6Q8N531 539 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 HM13Q8TCT9 377 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 PHF21BQ96EK2 531 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 PDLIM5Q96HC4 596 aaKnown RBP20.76■□□□□ 0.91
CPNE1-204ENST00000397443 PCED1AQ9H1Q7 454 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 RABEP2Q9H5N1 569 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 SPAG17Q6Q759 2223 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 FAM86C2PA6NEL3 165 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 GPR89AB7ZAQ6 455 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 DLX3O60479 287 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 SLCO2B1O94956 709 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 HOXC4P09017 264 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-204ENST00000397443 GPR89BP0CG08 455 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 ENO3P13929 434 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-204ENST00000397443 RPL10P27635 214 aaKnown RBP20.76■□□□□ 0.91
CPNE1-204ENST00000397443 ZNF658BQ4V348 819 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-204ENST00000397443 WDR5BQ86VZ2 330 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 LONP2Q86WA8 852 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 HID1Q8IV36 788 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 KLHDC7BQ96G42 594 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 ATOH8Q96SQ7 321 aa20.76■□□□□ 0.91
CPNE1-204ENST00000397443 CCDC163A0A0D9SF12 145 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 H3BM21 787 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 KERAO60938 352 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 LSP1P33241 339 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 PDK4Q16654 411 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 XKR5Q6UX68 686 aa20.75■□□□□ 0.91
CPNE1-204ENST00000397443 GPSM1Q86YR5 675 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms