RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PAQR7Q86WK9 346 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 RASGEF1CQ8N431 466 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 MFSD8Q8NHS3 518 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 HBEGFQ99075 208 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 CIB1Q99828 191 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 BCAS3Q9H6U6 928 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 LYARQ9NX58 379 aaKnown RBP12.2□□□□□ -0.46
SMU1-201ENST00000397149 KIAA0556O60303 1618 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 A0A0J9YYE9 177 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 GRM6O15303 877 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
SMU1-201ENST00000397149 CBLP22681 906 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 CLCN5P51795 746 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 PLA2G16P53816 162 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 CCINQ13939 588 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 AGO4Q9HCK5 861 aaKnown RBP12.2□□□□□ -0.46
SMU1-201ENST00000397149 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 SHOXO15266 292 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 ORC5O43913 435 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 EDNRAP25101 427 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 HERV-K104P61576 105 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 RNASEH2BQ5TBB1 312 aaKnown RBP12.2□□□□□ -0.46
SMU1-201ENST00000397149 XRRA1Q6P2D8 792 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 RFWD3Q6PCD5 774 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 CXCL17Q6UXB2 119 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 THEM6Q8WUY1 208 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 SLC38A4Q969I6 547 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 ADAD1Q96M93 576 aaKnown RBP12.2□□□□□ -0.46
SMU1-201ENST00000397149 STATHP02808 62 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 ERVK-21P61565 698 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 ZNF268Q14587 947 aaPredicted RBP12.2□□□□□ -0.46
SMU1-201ENST00000397149 PLGLAQ15195 96 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 LCN9Q8WX39 176 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 ZDHHC15Q96MV8 337 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 TREX2Q9BQ50 279 aaPredicted RBP12.2□□□□□ -0.46
SMU1-201ENST00000397149 CDT1Q9H211 546 aa12.2□□□□□ -0.46
SMU1-201ENST00000397149 TRUB2O95900 331 aaKnown RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 DRD4P21917 467 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 IDSP22304 550 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 TEAD4Q15561 434 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 UBXN11Q5T124 520 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 GLYATQ6IB77 296 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 BSNDQ8WZ55 320 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 A0A1B0GVC2 190 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 H0YGN5 161 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 TMEM11P17152 192 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 PRKAR1BP31321 381 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 PSEN1P49768 467 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 EIF5AP63241 154 aaKnown RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 SP2Q02086 613 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 BDH1Q02338 343 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 GANABQ14697 944 aaKnown RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 ZDHHC17Q8IUH5 632 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 RADILQ96JH8 1075 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 ERGIC2Q96RQ1 377 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 NPLQ9BXD5 320 aaPredicted RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 PCDH18Q9HCL0 1135 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 ERVK-5Q9HDB9 667 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 SSX4O60224 188 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 ATG13O75143 517 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 CDK14O94921 469 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 CNOT4O95628 575 aaKnown RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 PTNP21246 168 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 BACE1P56817 501 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 CHST9Q7L1S5 443 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 AGAP11Q8TF27 550 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 TRMT61BQ9BVS5 477 aaKnown RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 TM9SF3Q9HD45 589 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 CHST7Q9NS84 486 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 PNPOQ9NVS9 261 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 EMC3Q9P0I2 261 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 GMIPQ9P107 970 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 FAM149AA5PLN7 773 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 AKAP3O75969 853 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 ADH1AP07327 375 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 PITPNAQ00169 270 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 DUSP4Q13115 394 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 SNX29P2Q8IUI4 249 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 ELOA2Q8IYF1 753 aaPredicted RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 ZNF557Q8N988 423 aaPredicted RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 BORCS5Q969J3 196 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 REV1Q9UBZ9 1251 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 UBXN7O94888 489 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 CCNE2O96020 404 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 UGT2B4P06133 528 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 ZNF14P17017 642 aaPredicted RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 SLITRK4Q8IW52 837 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 RBFAQ8N0V3 343 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 DEFB119Q8N690 84 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 EZH1Q92800 747 aaPredicted RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 UFD1Q92890 307 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 TMEM203Q969S6 136 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 TTTY10Q9BZA0 68 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 C14orf105Q9NVL8 296 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 DNAAF2Q9NVR5 837 aaKnown RBP12.19□□□□□ -0.46
SMU1-201ENST00000397149 ITGB1BP2Q9UKP3 347 aa12.19□□□□□ -0.46
SMU1-201ENST00000397149 OR6C70A6NIJ9 312 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms