RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ACAD11Q709F0 780 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 TAS2R42Q7RTR8 314 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 LONP2Q86WA8 852 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 NXPE1Q8N323 547 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 PTGR2Q8N8N7 351 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 SIDT2Q8NBJ9 832 aaKnown RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 PHF21BQ96EK2 531 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 NUF2Q9BZD4 464 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 BTBD1Q9H0C5 482 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 ASB8Q9H765 288 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 MEAF6Q9HAF1 191 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 LATS2Q9NRM7 1088 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 KLHL42Q9P2K6 505 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 GNPTGQ9UJJ9 305 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 CDYLQ9Y232 598 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 FRYLO94915 3013 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 PRR33A8MZF0 331 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 UBXN8O00124 270 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 AREL1O15033 823 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 MAGEC1O60732 1142 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 PCDH8O95206 1070 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 RPS17P08708 135 aaKnown RBP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 CYP2A6P11509 494 aaPredicted RBP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 ZNF30P17039 623 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 ACSL1P33121 698 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 MMP12P39900 470 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 TAS2R38P59533 333 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 CHRNA6Q15825 494 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 DNAL1Q4LDG9 190 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 MAML2Q8IZL2 1156 aaPredicted RBP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 AFAP1L2Q8N4X5 818 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 FAM160A2Q8N612 972 aaPredicted RBP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 FRMD1Q8N878 549 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 RBM15BQ8NDT2 890 aaKnown RBP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 GPR26Q8NDV2 337 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 AGR3Q8TD06 166 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 ACTRT2Q8TDY3 377 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 WRAP53Q9BUR4 548 aaKnown RBP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 CLPBQ9H078 707 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 WDR55Q9H6Y2 383 aaPredicted RBP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 TNFRSF12AQ9NP84 129 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 MRGBPQ9NV56 204 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.87□□□□□ -0.03
SCAF11-204ENST00000395454 SMOXQ9NWM0 555 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 FADS3Q9Y5Q0 445 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 LAMA1P25391 3075 aa14.87□□□□□ -0.03
SCAF11-204ENST00000395454 B2RBV5 119 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TMEM233B4DJY2 109 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 SPINT1O43278 529 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 PLRG1O43660 514 aaKnown RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 GPR37L1O60883 481 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 EPHA3P29320 983 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 RAP1GDS1P52306 607 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 DCDC1P59894 354 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 ARHGEF7Q14155 803 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TSNQ15631 228 aaKnown RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 WASHC2DQ5SRD0 308 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 CYHR1Q6ZMK1 362 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 CHSY3Q70JA7 882 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 RAB44Q7Z6P3 723 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 PELI3Q8N2H9 469 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 FAM131CQ96AQ9 280 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 FAM136AQ96C01 138 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 CMTM5Q96DZ9 223 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 LINGO1Q96FE5 620 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TOE1Q96GM8 510 aaKnown RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TRPM6Q9BX84 2022 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 RNF112Q9ULX5 631 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 INVSQ9Y283 1065 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 STK38LQ9Y2H1 464 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3DA0A087WVF3 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3IA0A087WXS9 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3EA0A087X179 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3KA0A087X1G2 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3FA6NER0 549 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3LB9A6J9 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 E5RI56 91 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 E9PBE3 544 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 CDC7O00311 574 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 KLHL41O60662 606 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 IGLV3-19P01714 112 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 C1SP09871 688 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 ELFN1P0C7U0 828 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3HP0C7X1 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 VIPR1P32241 457 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 FNTBP49356 437 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 BTKQ06187 659 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 KLF10Q13118 480 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 UGT3A2Q3SY77 523 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 USP39Q53GS9 565 aaKnown RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3GQ6DHY5 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3CQ6IPX1 549 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 TBC1D3Q8IZP1 549 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 FBXO27Q8NI29 283 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 CXorf40AQ8TE69 158 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 EEF1AKMT1Q8WVE0 214 aa14.86□□□□□ -0.03
SCAF11-204ENST00000395454 CCDC97Q96F63 343 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 FNDC3AQ9Y2H6 1198 aaKnown RBP14.86□□□□□ -0.03
SCAF11-204ENST00000395454 EML5Q05BV3 1969 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 A8MUI8 341 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms