RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SPATA22Q8NHS9 363 aa15.4■□□□□ 0.06
SNCA-205ENST00000394991 BRSK1Q8TDC3 778 aa15.4■□□□□ 0.06
SNCA-205ENST00000394991 MARVELD3Q96A59 401 aa15.4■□□□□ 0.06
SNCA-205ENST00000394991 WWP1Q9H0M0 922 aa15.4■□□□□ 0.06
SNCA-205ENST00000394991 ACTR5Q9H9F9 607 aaPredicted RBP15.4■□□□□ 0.06
SNCA-205ENST00000394991 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
SNCA-205ENST00000394991 ARHGAP10A1A4S6 786 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 OR2AG2A6NM03 316 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 TMEM150CB9EJG8 249 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 UGT1A9O60656 530 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 NDST3O95803 873 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 MT-CYBP00156 380 aaPredicted RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 CYP1A2P05177 515 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 UGT1A6P19224 532 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 POLR2CP19387 275 aaPredicted RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 UGT1A1P22309 533 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 UGT1A4P22310 534 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 OTX2P32243 289 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 RIPPLY3P57055 190 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 ELOAQ14241 798 aaKnown RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 PDK2Q15119 407 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 NOMO1Q15155 1222 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 METRNLQ641Q3 311 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 ZNF385CQ66K41 422 aaPredicted RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 HGSNATQ68CP4 663 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 TMEM220Q6QAJ8 160 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 IGFL3Q6UXB1 125 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 SPOCD1Q6ZMY3 1216 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 NT5DC3Q86UY8 548 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 C12orf66Q96MD2 445 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 TTC25Q96NG3 672 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 AGAP3Q96P47 875 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 XPO4Q9C0E2 1151 aaKnown RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 ILKAPQ9H0C8 392 aaPredicted RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 SLC25A51Q9H1U9 297 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 ZNF552Q9H707 407 aaPredicted RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 KIR3DX1Q9H7L2 352 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 UGT1A7Q9HAW7 530 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 UGT1A10Q9HAW8 530 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 UGT1A8Q9HAW9 530 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 FANCEQ9HB96 536 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 CBX8Q9HC52 389 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 ZBTB20Q9HC78 741 aaPredicted RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 IL26Q9NPH9 171 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 TMEM63CQ9P1W3 806 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 POMT2Q9UKY4 750 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 PCDHGA10Q9Y5H3 936 aa15.39■□□□□ 0.05
SNCA-205ENST00000394991 COPG1Q9Y678 874 aaKnown RBP15.39■□□□□ 0.05
SNCA-205ENST00000394991 MYO1FO00160 1098 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 MASP2O00187 686 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 HNRNPRO43390 633 aaKnown RBP15.38■□□□□ 0.05
SNCA-205ENST00000394991 KLF7O75840 302 aaPredicted RBP15.38■□□□□ 0.05
SNCA-205ENST00000394991 CDH3P22223 829 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 MYBPC3Q14896 1274 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 LYPLAL1Q5VWZ2 237 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 ARMC6Q6NXE6 501 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 CAVIN1Q6NZI2 390 aaKnown RBP15.38■□□□□ 0.05
SNCA-205ENST00000394991 FAM151BQ6UXP7 276 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 CUZD1Q86UP6 607 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 PLD5Q8N7P1 536 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 BEND7Q8N7W2 519 aaPredicted RBP15.38■□□□□ 0.05
SNCA-205ENST00000394991 DDHD1Q8NEL9 900 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 NAT14Q8WUY8 206 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 UBE2Q2Q8WVN8 375 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 UNKQ9C0B0 810 aaKnown RBP15.38■□□□□ 0.05
SNCA-205ENST00000394991 ZCCHC2Q9C0B9 1178 aaKnown RBP15.38■□□□□ 0.05
SNCA-205ENST00000394991 MYO7BQ6PIF6 2116 aa15.38■□□□□ 0.05
SNCA-205ENST00000394991 E2F3O00716 465 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
SNCA-205ENST00000394991 KRT38O76015 456 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 ST6GAL1P15907 406 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 HLA-DPA1P20036 260 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 CYP2A7P20853 494 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 GRNP28799 593 aaKnown RBP15.37■□□□□ 0.05
SNCA-205ENST00000394991 HMGCLP35914 325 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 GLRBP48167 497 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 LMAN1P49257 510 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 AP1B1Q10567 949 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 LLGL1Q15334 1064 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 SLC14A2Q15849 920 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 DCAF10Q5QP82 559 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 LDLRAP1Q5SW96 308 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 GPRC6AQ5T6X5 926 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 Q6ZS92 163 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 TMEM151BQ8IW70 566 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 GALNT16Q8N428 558 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 ST6GALNAC3Q8NDV1 305 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 ZFPM2Q8WW38 1151 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 RAPGEF5Q92565 580 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 ZNF830Q96NB3 372 aaPredicted RBP15.37■□□□□ 0.05
SNCA-205ENST00000394991 RNF157Q96PX1 679 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 NRTNQ99748 197 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 C1GALT1Q9NS00 363 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 ENTPD4Q9Y227 616 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 CSAG2Q9Y5P2 127 aa15.37■□□□□ 0.05
SNCA-205ENST00000394991 DNMT3AQ9Y6K1 912 aaPredicted RBP15.37■□□□□ 0.05
SNCA-205ENST00000394991 SETD2Q9BYW2 2564 aaPredicted RBP15.37■□□□□ 0.05
SNCA-205ENST00000394991 PKDREJQ9NTG1 2253 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms