RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 HPP00738 406 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 HOXC4P09017 264 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 NBPF7P0C2Y1 421 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 ATP6V1B1P15313 513 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 VEGFAP15692 232 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 CDH15P55291 814 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 CYCSP99999 105 aaKnown RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 FOXD4Q12950 439 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 FGFBP1Q14512 234 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 DRAP1Q14919 205 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 ZNF79Q15937 498 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 KLHL26Q53HC5 615 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 WSCD1Q658N2 575 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 CORO6Q6QEF8 472 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 TIPARPQ7Z3E1 657 aaKnown RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 TSPAN33Q86UF1 283 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 RASGEF1CQ8N431 466 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 MARVELD2Q8N4S9 558 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 GCSAMQ8N6F7 178 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 L3MBTL4Q8NA19 623 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 NUP37Q8NFH4 326 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 OR1J2Q8NGS2 313 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 OR14L1PQ8NHC6 308 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 SMAP2Q8WU79 429 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 SERAC1Q96JX3 654 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 RTBDNQ9BSG5 229 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 SEMA6AQ9H2E6 1030 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 OLFML3Q9NRN5 406 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 RASSF1Q9NS23 344 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 TEX10Q9NXF1 929 aaPredicted RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 FEM1BQ9UK73 627 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 PLCL2Q9UPR0 1127 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 LRCH1Q9Y2L9 728 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 AAR2Q9Y312 384 aaKnown RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 FCGBPQ9Y6R7 5405 aaPredicted RBP0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 FAM205AQ6ZU69 1335 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 OR2M5A3KFT3 312 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 USP17L23D6RBM5 183 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 SNAP23O00161 211 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 GALR3O60755 368 aaPredicted RBP0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 SEC31AO94979 1220 aaKnown RBP0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 HOXB5P09067 269 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 THEGLP0DJG4 465 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 ACP2P11117 423 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 EFNA1P20827 205 aaPredicted RBP0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 CDAP32320 146 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 CLCN4P51793 760 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 PRKAA1Q13131 559 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 PICALMQ13492 652 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 PDE1CQ14123 709 aaPredicted RBP0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 ANKRD1Q15327 319 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 CDONQ4KMG0 1287 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 MOGAT3Q86VF5 341 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 HM13Q8TCT9 377 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 GCC1Q96CN9 775 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 RRNAD1Q96FB5 475 aaKnown RBP0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 ZNF486Q96H40 463 aaPredicted RBP0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 KLHL15Q96M94 604 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 SIL1Q9H173 461 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 PDFQ9HBH1 243 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 ACKR4Q9NPB9 350 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 NLRC4Q9NPP4 1024 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 COPG2Q9UBF2 871 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 GRID1Q9ULK0 1009 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 B3GALT5Q9Y2C3 310 aa0.94□□□□□ -2.26
RNU6-239P-201ENST00000390990 TEX13CA0A0J9YWL9 993 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 FAM237AA0A1B0GTK4 181 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 FOXH1O75593 365 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 PIGNO95427 931 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 SELLP14151 372 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 HRH2P25021 359 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 GPD2P43304 727 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 HERC4Q5GLZ8 1057 aaPredicted RBP0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 WDR45BQ5MNZ6 344 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 MAP3K21Q5TCX8 1036 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 RSBN1Q5VWQ0 802 aaPredicted RBP0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 KIF6Q6ZMV9 814 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 BTN2A1Q7KYR7 527 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 ADGRD2Q7Z7M1 963 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 ZNF554Q86TJ5 538 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 MAPKAPK5-AS1Q8N8E1 139 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 USP38Q8NB14 1042 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 OR1J1Q8NGS3 322 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 RHOXF1Q8NHV9 184 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 NUS1Q96E22 293 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 NSL1Q96IY1 281 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 COG8Q96MW5 612 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 MYADMQ96S97 322 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 GFI1Q99684 422 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 CTRCQ99895 268 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 CRB3Q9BUF7 120 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 SLC6A13Q9NSD5 602 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 NDE1Q9NXR1 346 aa0.93□□□□□ -2.26
RNU6-239P-201ENST00000390990 LOC101059948A0A1B0GTJ6 334 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 A0A1W2PQ72 361 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 LDLRAD4O15165 306 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 HDAC3O15379 428 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 PLPP2O43688 288 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 THY1P04216 161 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms