RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 GEN1Q17RS7 908 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 KIAA1841Q6NSI8 718 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 AFTPHQ6ULP2 937 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 RETREG3Q86VR2 466 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 OR13F1Q8NGS4 319 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 ZNF461Q8TAF7 563 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 MAGEE2Q8TD90 523 aaPredicted RBP16.91■□□□□ 0.3
TRIM27-201ENST00000377194 TWIST2Q8WVJ9 160 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 PLD4Q96BZ4 506 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 SLC45A3Q96JT2 553 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 MROQ9BYG7 248 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 DERL2Q9GZP9 239 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 CWH43Q9H720 699 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 SEMA4BQ9NPR2 832 aaPredicted RBP16.91■□□□□ 0.3
TRIM27-201ENST00000377194 TRPM5Q9NZQ8 1165 aa16.91■□□□□ 0.3
TRIM27-201ENST00000377194 LCHNA4D1U4 455 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 TRIM64BA6NI03 449 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 NCF1BA6NI72 391 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 NCF1CA8MVU1 366 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 SUPT3HB4E1H0 165 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 AZIN1O14977 448 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 KERAO60938 352 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 NIPSNAP2O75323 286 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 ECI2O75521 394 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 JRKO75564 520 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 SNAP29O95721 258 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 NCF1P14598 390 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 GPX3P22352 226 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 FASP25445 335 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 PRDX3P30048 256 aaKnown RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 SPCS2Q15005 226 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 MAPK11Q15759 364 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 ATP6AP1Q15904 470 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 PHYKPLQ8IUZ5 450 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 TERB1Q8NA31 727 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 STAG3L4Q8TBR4 150 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 FUBP1Q96AE4 644 aaKnown RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 ESAMQ96AP7 390 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 IGSF21Q96ID5 467 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 SLC22A12Q96S37 553 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 C9orf16Q9BUW7 83 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 KLF16Q9BXK1 252 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 SYTL2Q9HCH5 934 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 RNF112Q9ULX5 631 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 BTRCQ9Y297 605 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 BACE2Q9Y5Z0 518 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 PSMD11O00231 422 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 GMNNO75496 209 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 LPOP22079 712 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 IL10P22301 178 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 MC4RP32245 332 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 AGTR2P50052 363 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 YBX1P67809 324 aaKnown RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 ZXDBP98169 803 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 CLCQ05315 142 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 ZIK1Q3SY52 487 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 TIGD2Q4W5G0 525 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 IRAK1BP1Q5VVH5 260 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 OVCA2Q8WZ82 227 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 LHPPQ9H008 270 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 RAD21L1Q9H4I0 556 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 KLQ9UEF7 1012 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 AFF4Q9UHB7 1163 aaKnown RBP16.9■□□□□ 0.3
TRIM27-201ENST00000377194 B3GNT3Q9Y2A9 372 aa16.9■□□□□ 0.3
TRIM27-201ENST00000377194 FAM47E-STBD1D6RA91 191 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 ACOX3O15254 700 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 ABLIM3O94929 683 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 TSPAN12O95859 305 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 LINC00032P0C843 101 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 PSMA3P25788 255 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 INAVAQ3KP66 663 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 CTSL3PQ5NE16 218 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 KANK2Q63ZY3 851 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 CHST9Q7L1S5 443 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 RAB44Q7Z6P3 723 aaPredicted RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 SIDT2Q8NBJ9 832 aaKnown RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 BHMTQ93088 406 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 EID2BQ96D98 161 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 SH3YL1Q96HL8 342 aaPredicted RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 MYRFLQ96LU7 910 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 BEGAINQ9BUH8 593 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 RETREG1Q9H6L5 497 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 DNMT3BQ9UBC3 853 aaKnown RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 WARS2Q9UGM6 360 aaKnown RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 TIMM22Q9Y584 194 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 OAS3Q9Y6K5 1087 aaKnown RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 V9GYQ6 96 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 NPEPPSL1A6NEC2 478 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 CCT8P50990 548 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 ATN1P54259 1190 aaPredicted RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 SELENBP1Q13228 472 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 VASH1Q7L8A9 365 aaPredicted RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 TMCO2Q7Z6W1 182 aaPredicted RBP16.89■□□□□ 0.29
TRIM27-201ENST00000377194 TMEM150AQ86TG1 271 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 DDIASQ8IXT1 998 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 FBXO39Q8N4B4 442 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 DHRSXQ8N5I4 330 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 ZUFSPQ96AP4 578 aa16.89■□□□□ 0.29
TRIM27-201ENST00000377194 ZNF225Q9UK10 706 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms