RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 TLX1P31314 330 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CDH12P55289 794 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 RFTN2Q52LD8 501 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 UBAP2Q5T6F2 1119 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 XAGE5Q8WWM1 108 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 KCTD13Q8WZ19 329 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 HSPBAP1Q96EW2 488 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 DIRAS2Q96HU8 199 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 PIWIL1Q96J94 861 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 RGPD8O14715 1765 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 XYLBO75191 536 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 NIPSNAP2O75323 286 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 UGT2B17O75795 530 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ELFN1P0C7U0 828 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GUCA1AP43080 201 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 C2orf80Q0P641 193 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 TAF1AQ15573 450 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GPR153Q6NV75 609 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 TMEM126BQ8IUX1 230 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 RAVER1Q8IY67 606 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 TMBIM1Q969X1 311 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 PRR11Q96HE9 360 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 RHBGQ9H310 441 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ABCB9Q9NP78 766 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ASAH2Q9NR71 780 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GULP1Q9UBP9 304 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 TBC1D3BA6NDS4 549 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 H3BM21 787 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 J3QRK9 145 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 SLC9A3R1O14745 358 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 SSNA1O43805 119 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 PABPC4LP0CB38 370 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 MYL9P24844 172 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GALNT2Q10471 571 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GCNT6Q5T4J0 391 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 MSANTD2Q6P1R3 559 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 XKR5Q6UX68 686 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 TMPRSS11AQ6ZMR5 421 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 FAM92BQ6ZTR7 304 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ANKRD23Q86SG2 305 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 WDTC1Q8N5D0 677 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 SMG8Q8ND04 991 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 C12orf43Q96C57 262 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 FBXL8Q96CD0 374 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CDK15Q96Q40 435 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GINS4Q9BRT9 223 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 FBRSL1Q9HCM7 1045 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 MKS1Q9NXB0 559 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GTF2IRD1Q9UHL9 959 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ZFP37Q9Y6Q3 630 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 NRXN3Q9Y4C0 1643 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 A0A1W2PP18 115 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 A0A1W2PPW3 197 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 KERAO60938 352 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ERN1O75460 977 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 FYNP06241 537 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CCNYL3P0C7X3 344 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 GABRR2P28476 465 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CCR4P51679 360 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 SCN1BQ07699 218 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 C15orf39Q6ZRI6 1047 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CXXC5Q7LFL8 322 aaKnown RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 KRT74Q7RTS7 529 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 C17orf64Q86WR6 236 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CXorf40AQ8TE69 158 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF222Q9UK12 451 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF487B1APH4 448 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 BTBD19C9JJ37 291 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 K7EPI3 171 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 SLC22A1O15245 554 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 FFAR2O15552 330 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 HCRTO43612 131 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ECI2O75521 394 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 PRKD3O94806 890 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 AP2A2O94973 939 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 CCR10P46092 362 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 COPZ1P61923 177 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 AP1S1P61966 158 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 HMGCS1Q01581 520 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 SRSF11Q05519 484 aaKnown RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 TEAD4Q15561 434 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 TYSND1Q2T9J0 566 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 CHSY3Q70JA7 882 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 RPS27LQ71UM5 84 aaKnown RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 TRIM74Q86UV6 250 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 TRIM73Q86UV7 250 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 KIFC1Q9BW19 673 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ZIM2Q9NZV7 527 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 EFCAB9A8MZ26 197 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 HTRA2O43464 458 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 DHFRP00374 187 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 FGBP02675 491 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 C8BP07358 591 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 EFNA1P20827 205 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 SSR2P43308 183 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 DGKQP52824 942 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 RAB25P57735 213 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms