RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ACAP2Q15057 778 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 ANGPT1Q15389 498 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 LSM12Q3MHD2 195 aaKnown RBP14.08□□□□□ -0.15
HMGA1-203ENST00000374116 ZNF789Q5FWF6 425 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 LRRC73Q5JTD7 316 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 OGFRL1Q5TC84 451 aaPredicted RBP14.08□□□□□ -0.15
HMGA1-203ENST00000374116 RNF111Q6ZNA4 994 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 SPATA6LQ8N4H0 392 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 OR2T3Q8NH03 318 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 BRSK1Q8TDC3 778 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 UBXN10Q96LJ8 280 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 BIRC8Q96P09 236 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 CEP44Q9C0F1 390 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 SERGEFQ9UGK8 458 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 TMED5Q9Y3A6 229 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 SDK1Q7Z5N4 2213 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 GOLGA8QA0A0J9YX86 632 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 LOC100653049A0A140TA62 436 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 GOLGA8OA6NCC3 632 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 TRPC5OSA6NMA1 111 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 GOLGA8NF8WBI6 632 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 KPNA3O00505 521 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 KRT34O76011 436 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 WISP3O95389 354 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 NDST3O95803 873 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 S1PR4O95977 384 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 UGT2B4P06133 528 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 CCR10P46092 362 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 RPS14P62263 151 aaKnown RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 MYLK3Q32MK0 819 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 NADK2Q4G0N4 442 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 PGM2L1Q6PCE3 622 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 FRMD7Q6ZUT3 714 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 CAMK1DQ8IU85 385 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 GPR150Q8NGU9 434 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 ISG20Q96AZ6 181 aaKnown RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 MOCOSQ96EN8 888 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 SIPA1Q96FS4 1042 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 DNAJC1Q96KC8 554 aaKnown RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 YIPF2Q9BWQ6 316 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 RSPH9Q9H1X1 276 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 PRMT8Q9NR22 394 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-203ENST00000374116 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.08□□□□□ -0.163e-28■■■□□ 14.8
HMGA1-203ENST00000374116 IL36AQ9UHA7 158 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 RAB26Q9ULW5 256 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 KCTD3Q9Y597 815 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 PCDHGC4Q9Y5F7 938 aa14.08□□□□□ -0.16
HMGA1-203ENST00000374116 A0A1W2PP55 124 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 RGSL1A5PLK6 1076 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 H0Y858 1186 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 NEMP1O14524 444 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 CBFA2T3O75081 653 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 APBB3O95704 486 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 IGSF6O95976 241 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 PRLP01236 227 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 ITGAXP20702 1163 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 CES1P23141 567 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-203ENST00000374116 SEMG2Q02383 582 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 NSUN2Q08J23 767 aaKnown RBP eCLIP14.07□□□□□ -0.16
HMGA1-203ENST00000374116 CCDC92Q53HC0 331 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-203ENST00000374116 RALGPS1Q5JS13 557 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 FAM45BPQ6NSW5 357 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 FBXL19Q6PCT2 694 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 KLHL35Q6PF15 583 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 SLC22A9Q8IVM8 553 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 METTL25Q8N6Q8 603 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 RP9Q8TA86 221 aaKnown RBP14.07□□□□□ -0.16
HMGA1-203ENST00000374116 FAM45AQ8TCE6 357 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 OR8D1Q8WZ84 308 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 ITPKCQ96DU7 683 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 FAR2Q96K12 515 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 HEPHQ9BQS7 1158 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 NUF2Q9BZD4 464 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 ZNF385DQ9H6B1 395 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 EML4Q9HC35 981 aaKnown RBP14.07□□□□□ -0.16
HMGA1-203ENST00000374116 ACSS2Q9NR19 701 aa14.07□□□□□ -0.16
HMGA1-203ENST00000374116 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-203ENST00000374116 SH3PXD2BA1X283 911 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 TRMUO75648 421 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 RPP40O75818 363 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 IPO13O94829 963 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 TNFAIP8O95379 198 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ZNF24P17028 368 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 PIK3R1P27986 724 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 EPHA3P29320 983 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 PPARGP37231 505 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 CST6Q15828 149 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 PDCD4Q53EL6 469 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 MRNIPQ6NTE8 343 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 DEFB107AQ8IZN7 70 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 AFAP1L2Q8N4X5 818 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 AADATQ8N5Z0 425 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ICA1LQ8NDH6 482 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ZFP28Q8NHY6 868 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 TRPC4APQ8TEL6 797 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 GANCQ8TET4 914 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ARRDC3Q96B67 414 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 SGF29Q96ES7 293 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms