RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 VLDLRP98155 873 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 PRKD1Q15139 912 aaPredicted RBP15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 AVL9Q8NBF6 648 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 HMGB4Q8WW32 186 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 SCAMP1O15126 338 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 ZBTB11O95625 1053 aaPredicted RBP15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 ALOX5P09917 674 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 MPSTP25325 297 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 CRHR1P34998 444 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 MSANTD1Q6ZTZ1 278 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 PRELID2Q8N945 189 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 ZNF527Q8NB42 609 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 TSEN2Q8NCE0 465 aaKnown RBP15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 DNAJC19Q96DA6 116 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 MKKSQ9NPJ1 570 aaPredicted RBP15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 RBM47A0AV96 593 aaKnown RBP15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 PRORSD1PA6NEY8 169 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 KCNU1A8MYU2 1149 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 AREL1O15033 823 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 AHCYL1O43865 530 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 DNAJA2O60884 412 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 CD2P06729 351 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 ITGB5P18084 799 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 VARS2Q5ST30 1063 aaKnown RBP15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 TP53INP1Q96A56 240 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 ART5Q96L15 291 aa15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 GTPBP2Q9BX10 602 aaKnown RBP15.51■□□□□ 0.07
NUCKS1-201ENST00000367142 ADAMDEC1O15204 470 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 MATN3O15232 486 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 RGS10O43665 173 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ALPPP05187 535 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 IL23RQ5VWK5 629 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 LRRC55Q6ZSA7 311 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ARHGAP22Q7Z5H3 698 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 SH3RF1Q7Z6J0 888 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 GLIS3Q8NEA6 775 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 GPR151Q8TDV0 419 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 B4DGG1 531 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 PEX12O00623 359 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 RPL5P46777 297 aaKnown RBP15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 FOLH1Q04609 750 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 CLCQ05315 142 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 IL10RBQ08334 325 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ITGB3BPQ13352 177 aaPredicted RBP15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 PHF19Q5T6S3 580 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 SPRYD7Q5W111 196 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 SLC30A8Q8IWU4 369 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 TRPV5Q9NQA5 729 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 CLDND1Q9NY35 253 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 FSHRP23945 695 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 C1QTNF8P60827 252 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 XIAPP98170 497 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 LRRC32Q14392 662 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 TAF1AQ15573 450 aaPredicted RBP15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.5■□□□□ 0.073e-33■□□□□ 10.5
NUCKS1-201ENST00000367142 KLHL26Q53HC5 615 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 SYVN1Q86TM6 617 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 OR7D4Q8NG98 312 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ACOT12Q8WYK0 555 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 GRIN2DO15399 1336 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 PRPS2P11908 318 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 PUM1Q14671 1186 aaKnown RBP eCLIP15.5■□□□□ 0.077e-21■■□□□ 12.7
NUCKS1-201ENST00000367142 MTX3Q5HYI7 312 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 CERS5Q8N5B7 392 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 WDR26Q9H7D7 661 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 DNAJC28Q9NX36 388 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 IL36AQ9UHA7 158 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 HYKKA2RU49 373 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ELOA3DA6NLF2 546 aaPredicted RBP15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 CPSF4LA6NMK7 179 aaKnown RBP15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ELOA3BQ3SY89 546 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 CARD16Q5EG05 197 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 PYHIN1Q6K0P9 492 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ENPP7Q6UWV6 458 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ZYG11AQ6WRX3 759 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ELOA3Q8NG57 546 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 GPATCH1Q9BRR8 931 aaKnown RBP15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ASB3Q9Y575 518 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 AP4B1Q9Y6B7 739 aa15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 ZC3H13Q5T200 1668 aaKnown RBP15.5■□□□□ 0.07
NUCKS1-201ENST00000367142 NME6O75414 186 aaPredicted RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 NADKO95544 446 aaPredicted RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 MARCKSL1P49006 195 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 DRG2P55039 364 aaKnown RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 TTMPQ5BVD1 217 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 AMZ2Q86W34 360 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 EMID1Q96A84 441 aaPredicted RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PPM1MQ96MI6 270 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 MECRQ9BV79 373 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 IFT27Q9BW83 186 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 LGR4Q9BXB1 951 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 TBL1XR1Q9BZK7 514 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PFDN2Q9UHV9 154 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 CLCA3PQ9Y6N3 262 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 AP2A1O95782 977 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 GOT2P00505 430 aaKnown RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 IL7RP16871 459 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 LCP2Q13094 533 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 ABCA11PQ4W5N1 156 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 FIP1L1Q6UN15 594 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms