RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 GPR17Q13304 367 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 P2RY6Q15077 328 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 SGSM1Q2NKQ1 1148 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 CTU2Q2VPK5 515 aaKnown RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 DPCR1Q3MIW9 517 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 KLHL10Q6JEL2 608 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 SEPT14Q6ZU15 432 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 PCGF5Q86SE9 256 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 GPALPP1Q8IXQ4 340 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 CNTROBQ8N137 903 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 DNAJC22Q8N4W6 341 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 PDILTQ8N807 584 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 SMARCE1Q969G3 411 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 GCC1Q96CN9 775 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 HVCN1Q96D96 273 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 MAGED4Q96JG8 741 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 EGLN2Q96KS0 407 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 UBXN10Q96LJ8 280 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 CFAP53Q96M91 514 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 MYCBPQ99417 103 aaPredicted RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 PIP5K1AQ99755 562 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 STRA6Q9BX79 667 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 RSPH9Q9H1X1 276 aaPredicted RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 PELI2Q9HAT8 420 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 SCPEP1Q9HB40 452 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 EPB41L5Q9HCM4 733 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 OLFML3Q9NRN5 406 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 RCC2Q9P258 522 aaKnown RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 LRWD1Q9UFC0 647 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 CNOT8Q9UFF9 292 aaKnown RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 SLC7A7Q9UM01 511 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 SMC3Q9UQE7 1217 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 R3HDM2Q9Y2K5 976 aaKnown RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 CCDC196A0A1B0GTZ2 297 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 DNM1LO00429 736 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 MPHOSPH10O00566 681 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CTAGE5O15320 804 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 IPO8O15397 1037 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 PLPP2O43688 288 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 PAGE4O60829 102 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 SEC14L2O76054 403 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 IPO7O95373 1038 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 GCNT3O95395 438 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 FRMD6-AS1P0C7T7 363 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CBLP22681 906 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CASQ1P31415 396 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 MAN1A1P33908 653 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CD151P48509 253 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 RPS18P62269 152 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 OLR1P78380 273 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 HMGN5P82970 282 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 MS4A2Q01362 244 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CDR2Q01850 454 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 DMTNQ08495 405 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 BIRC2Q13490 618 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 PEX6Q13608 980 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 RAPSNQ13702 412 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 MVPQ14764 893 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 TEAD2Q15562 447 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 FASTKD1Q53R41 847 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 C2CD6Q53TS8 623 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 IL27RAQ6UWB1 636 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CCDC73Q6ZRK6 1079 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 DENND5BQ6ZUT9 1274 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 LRRTM1Q86UE6 522 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CRYBG2Q8N1P7 616 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 LINC00612Q8N6U2 182 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 L3MBTL4Q8NA19 623 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 MNS1Q8NEH6 495 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 OR2T11Q8NH01 316 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 OR2L2Q8NH16 312 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 SUSD6Q92537 303 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 HTRA1Q92743 480 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 FAM149B1Q96BN6 582 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 OMA1Q96E52 524 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 NSL1Q96IY1 281 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 RPS6KC1Q96S38 1066 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 NAP1L4Q99733 375 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 GPATCH1Q9BRR8 931 aaKnown RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 HERPUD2Q9BSE4 406 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 MIOSQ9NXC5 875 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 CWC25Q9NXE8 425 aaPredicted RBP2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 FLRT3Q9NZU0 649 aa2.02□□□□□ -2.09
RNU4-42P-201ENST00000364738 PCNX3Q9H6A9 2034 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 RAD54L2Q9Y4B4 1467 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 CFAP65Q6ZU64 1925 aaKnown RBP2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 PRRC2AP48634 2157 aaKnown RBP2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 IGLV9-49A0A0B4J1Y8 123 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 OR2M5A3KFT3 312 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 VGLL3A8MV65 326 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 TMEM189-UBE2V1I3L0A0 370 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 PES1O00541 588 aaKnown RBP2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 HOXC11O43248 304 aaPredicted RBP2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 ZNF217O75362 1048 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 CLDN1O95832 211 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 H1F0P07305 194 aaKnown RBP2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 CCDC172P0C7W6 258 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 ZNF853P0CG23 659 aa2.01□□□□□ -2.09
RNU4-42P-201ENST00000364738 EPHA8P29322 1005 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms