RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TLX1P31314 330 aaPredicted RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 HSPA4P34932 840 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMPOP42166 694 aaKnown RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF81P51508 661 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 MYBPHQ13203 477 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF234Q14588 700 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 HLFQ16534 295 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 C6orf136Q5SQH8 315 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 MPP7Q5T2T1 576 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 KRT39Q6A163 491 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 CAVIN1Q6NZI2 390 aaKnown RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 RHBDF2Q6PJF5 856 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 GFRALQ6UXV0 394 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 MFSD6Q6ZSS7 791 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 MEPCEQ7L2J0 689 aaKnown RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMPRSS12Q86WS5 348 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 CCAR2Q8N163 923 aaKnown RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 SLC20A1Q8WUM9 679 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 SLC38A5Q8WUX1 472 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ROBO4Q8WZ75 1007 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 SMPDL3BQ92485 455 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 EXT2Q93063 718 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 SPDL1Q96EA4 605 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ERO1AQ96HE7 468 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF558Q96NG5 402 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF582Q96NG8 517 aaPredicted RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF385AQ96PM9 386 aaKnown RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 SEPHS2Q99611 448 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 MGME1Q9BQP7 344 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 SLC29A3Q9BZD2 475 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 LRMDAQ9H2I8 198 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 XAB2Q9HCS7 855 aaKnown RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 TCP11L1Q9NUJ3 509 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 CHCHD3Q9NX63 227 aaKnown RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 DPP3Q9NY33 737 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 NPAP1Q9NZP6 1156 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 GRIP1Q9Y3R0 1128 aa3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZFP37Q9Y6Q3 630 aaPredicted RBP3.61□□□□□ -1.83
RNU6-28P-201ENST00000362378 TRAV34A0A0B4J273 112 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZCWPW2A0A1B0GU75 182 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PRSS51A0A1B0GVH4 220 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 FAM90A10PA6NDY2 464 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 SRRM3A6NNA2 597 aaPredicted RBP3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 C15orf62A8K5M9 175 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZNF587BE7ETH6 402 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM178BH3BS89 294 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 CLIC2O15247 247 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 LDB3O75112 727 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 OAZ2O95190 189 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 GCNT3O95395 438 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PMS2P2O95744 297 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 RAB40ALP0C0E4 278 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 FAM106CPP0CH98 169 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 GM2AP17900 193 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 SP100P23497 879 aaPredicted RBP3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 EEF1B2P24534 225 aaKnown RBP3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 ATP5DP30049 168 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 CDC25CP30307 473 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 HOXA11P31270 313 aaPredicted RBP3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 USP8P40818 1118 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 SLC9A3P48764 834 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 BMXP51813 675 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 CAPZA1P52907 286 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 EGR4Q05215 589 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PRKCZQ05513 592 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 SLC20A2Q08357 652 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PNRC1Q12796 327 aaPredicted RBP3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 DLG1Q12959 904 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TUBB2AQ13885 445 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM35AQ53FP2 167 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 GRTP1Q5TC63 336 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 LINGO4Q6UY18 593 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PPP1R21Q6ZMI0 780 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PLEKHM3Q6ZWE6 761 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 DET1Q7L5Y6 550 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM219Q86XT9 240 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM255BQ8WV15 326 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 ZFAND2BQ8WV99 257 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 UBE2Q2Q8WVN8 375 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 MIB2Q96AX9 1013 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 PHF21AQ96BD5 680 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 SPSB1Q96BD6 273 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TMEM19Q96HH6 336 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 RMDN2Q96LZ7 410 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 MUS81Q96NY9 551 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 FEVQ99581 238 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 BTBD10Q9BSF8 475 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 DESI2Q9BSY9 194 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TUBB2BQ9BVA1 445 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 C2orf40Q9H1Z8 148 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 MRPL44Q9H9J2 332 aaKnown RBP3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TBC1D17Q9HA65 648 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 STK26Q9P289 416 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 WNT16Q9UBV4 365 aa3.6□□□□□ -1.83
RNU6-28P-201ENST00000362378 TAF1P21675 1872 aa3.59□□□□□ -1.83
RNU6-28P-201ENST00000362378 ELOVL7A1L3X0 281 aa3.59□□□□□ -1.83
RNU6-28P-201ENST00000362378 HTR3EA5X5Y0 456 aa3.59□□□□□ -1.83
RNU6-28P-201ENST00000362378 OR6C76A6NM76 312 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms