RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 NPAP1Q9NZP6 1156 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 C11orf21Q9P2W6 132 aa4.76□□□□□ -1.65
RPL39-201ENST00000361575 IGLV5-52A0A0A0MRZ9 124 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 CLEC18AA5D8T8 446 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 OR6C75A6NL08 312 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 CLDN14O95500 239 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 TOMM40O96008 361 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 CD22P20273 847 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 CDC25CP30307 473 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 MTHFRP42898 656 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 NAGLUP54802 743 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 RRS1Q15050 365 aaKnown RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 LBHQ53QV2 105 aaPredicted RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 GCNT6Q5T4J0 391 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 FAM91A1Q658Y4 838 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 C8orf82Q6P1X6 216 aaPredicted RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 IYDQ6PHW0 289 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 ZNF517Q6ZMY9 492 aaPredicted RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 MRPL10Q7Z7H8 261 aaKnown RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 MAP7D3Q8IWC1 876 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 ANKRD13CQ8N6S4 541 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 CLEC18CQ8NCF0 446 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 MOSPD2Q8NHP6 518 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 ASB5Q8WWX0 329 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 ABTB1Q969K4 478 aaPredicted RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 OTUB1Q96FW1 271 aaPredicted RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 SCMH1Q96GD3 660 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 ERO1AQ96HE7 468 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 CAMK1GQ96NX5 476 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 QRFPRQ96P65 431 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 FEVQ99581 238 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 FERMT1Q9BQL6 677 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 FUT8Q9BYC5 575 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 MRPL9Q9BYD2 267 aaKnown RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 DNAI2Q9GZS0 605 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 CWC25Q9NXE8 425 aaPredicted RBP4.75□□□□□ -1.65
RPL39-201ENST00000361575 MTRRQ9UBK8 725 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 SNX9Q9Y5X1 595 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 NFS1Q9Y697 457 aa4.75□□□□□ -1.65
RPL39-201ENST00000361575 PDS5AQ29RF7 1337 aaKnown RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 FAM90A10PA6NDY2 464 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 TRIM64A6NGJ6 449 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 TRIM64BA6NI03 449 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 PSMA7O14818 248 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 GAGE7O76087 117 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 KDM4BO94953 1096 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 ACSL3O95573 720 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 GAGE12FP0CL80 117 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 GAGE12GP0CL81 117 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 GAGE12IP0CL82 117 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 MYOD1P15172 320 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 HOXD3P31249 432 aaPredicted RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 ARRB2P32121 409 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 GMPSP49915 693 aaPredicted RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 ZNF75DP51815 510 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 PTENP60484 403 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 GAGE1Q13065 139 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 GAGE4Q13068 117 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 NFATC4Q14934 902 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 TDRD12Q587J7 1177 aaKnown RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 PRR27Q6MZM9 219 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 TMPRSS11FQ6ZWK6 438 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 DET1Q7L5Y6 550 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 TMPRSS11BQ86T26 416 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 TLK2Q86UE8 772 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 SMRP1Q8NCR6 262 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 MSANTD4Q8NCY6 345 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 PIGTQ969N2 578 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 RPL36ALQ969Q0 106 aaKnown RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 SNX21Q969T3 373 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 ST6GALNAC6Q969X2 333 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 SLAMF9Q96A28 289 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 FAM84BQ96KN1 310 aaPredicted RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 C3orf30Q96M34 536 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 EGFL8Q99944 293 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 FNDC11Q9BVV2 318 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 RBM38Q9H0Z9 239 aaKnown RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 RETREG1Q9H6L5 497 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 TMEM30AQ9NV96 361 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 POLLQ9UGP5 575 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 ABT1Q9ULW3 272 aaKnown RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 LIPT1Q9Y234 373 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 PADI2Q9Y2J8 665 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 PCDHAC2Q9Y5I4 1007 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 CACNA1IQ9P0X4 2223 aa4.74□□□□□ -1.65
RPL39-201ENST00000361575 COL3A1P02461 1466 aaPredicted RBP4.74□□□□□ -1.65
RPL39-201ENST00000361575 WDR91A4D1P6 747 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 OR5K3A6NET4 321 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 SRRM3A6NNA2 597 aaPredicted RBP4.73□□□□□ -1.65
RPL39-201ENST00000361575 SMTNL1A8MU46 457 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 CLDN4O14493 209 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 PPEF2O14830 753 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 LDB3O75112 727 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 SERPINI2O75830 405 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 LINC00271P0C7V0 271 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 TCEA1P23193 301 aaKnown RBP4.73□□□□□ -1.65
RPL39-201ENST00000361575 PTPN3P26045 913 aa4.73□□□□□ -1.65
RPL39-201ENST00000361575 HOXA11P31270 313 aaPredicted RBP4.73□□□□□ -1.65
RPL39-201ENST00000361575 KCNJ1P48048 391 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms