RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 ACRV1P26436 265 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 AP5B1Q2VPB7 878 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 RFTN2Q52LD8 501 aaPredicted RBP21.44■■□□□ 1.02
SHMT1-202ENST00000352886 FAM117BQ6P1L5 589 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 SLC39A11Q8N1S5 342 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 ZNF558Q96NG5 402 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 EGFL8Q99944 293 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 ACTL8Q9H568 366 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 CRLS1Q9UJA2 301 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 CLEC4EQ9ULY5 219 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 OAZ3Q9UMX2 235 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 MYRFQ9Y2G1 1151 aa21.44■■□□□ 1.02
SHMT1-202ENST00000352886 POLR3HQ9Y535 204 aaPredicted RBP21.44■■□□□ 1.02
SHMT1-202ENST00000352886 GLYATL1P3A0A0U1RQE8 302 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 DLGAP1O14490 977 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 GLUD1P00367 558 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 URODP06132 367 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 SPATA31D3P0C874 917 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 DGKAP23743 735 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 CDKN3Q16667 212 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 PHKG1Q16816 387 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 SPATA31D4Q6ZUB0 917 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 HID1Q8IV36 788 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 FAM217AQ8IXS0 508 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 MFSD2AQ8NA29 543 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 FAM47BQ8NA70 645 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 NUDT8Q8WV74 236 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 ACDQ96AP0 544 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 RNF103-CHMP3A0A140T963 221 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 NPPAP01160 153 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 GDF5P43026 501 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 CYP4F8P98187 520 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 AAK1Q2M2I8 961 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 AASDHQ4L235 1098 aaPredicted RBP21.43■■□□□ 1.02
SHMT1-202ENST00000352886 TCEAL8Q8IYN2 117 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 RMND5BQ96G75 393 aaPredicted RBP21.43■■□□□ 1.02
SHMT1-202ENST00000352886 C9orf16Q9BUW7 83 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 LRRC3Q9BY71 257 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 SMOXQ9NWM0 555 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 ANAPC2Q9UJX6 822 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 CROCCQ5TZA2 2017 aa21.43■■□□□ 1.02
SHMT1-202ENST00000352886 TRBV5-4A0A0C4DH59 114 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 DYTNA2CJ06 578 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 H3BNH8 94 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 CHRNA6Q15825 494 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 ADRM1Q16186 407 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 TPGS1Q6ZTW0 290 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 DPP10Q8N608 796 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 ZBTB2Q8N680 514 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 ISG20Q96AZ6 181 aaKnown RBP21.42■■□□□ 1.02
SHMT1-202ENST00000352886 PPM1MQ96MI6 270 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 HAUS8Q9BT25 410 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 HERC2P3Q9BVR0 1158 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 RPF2Q9H7B2 306 aaKnown RBP21.42■■□□□ 1.02
SHMT1-202ENST00000352886 MRPL17Q9NRX2 175 aaKnown RBP21.42■■□□□ 1.02
SHMT1-202ENST00000352886 LSM7Q9UK45 103 aaKnown RBP21.42■■□□□ 1.02
SHMT1-202ENST00000352886 DMTF1Q9Y222 760 aa21.42■■□□□ 1.02
SHMT1-202ENST00000352886 FCGR1AP12314 374 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 HTR1EP28566 365 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 DGKQP52824 942 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 LMAN2Q12907 356 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 ATP6AP1Q15904 470 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 DLEU7Q6UYE1 221 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 ZSWIM9Q86XI8 627 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 DEFB118Q96PH6 123 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 ATP13A3Q9H7F0 1226 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 WWOXQ9NZC7 414 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 ANGPTL3Q9Y5C1 460 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 V9GYQ6 96 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 SOCS5O75159 536 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 RSL1D1O76021 490 aaKnown RBP21.41■■□□□ 1.02
SHMT1-202ENST00000352886 CKMP06732 381 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 GNAO1P09471 354 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 HRH2P25021 359 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 MAPK8P45983 427 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 PIK3CGP48736 1102 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 OR4D2P58180 307 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 SEMG2Q02383 582 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 GPRC6AQ5T6X5 926 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 TSPAN33Q86UF1 283 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 RALGPS2Q86X27 583 aaPredicted RBP21.41■■□□□ 1.02
SHMT1-202ENST00000352886 BBS7Q8IWZ6 715 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 TRIML2Q8N7C3 387 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 LAMA2P24043 3122 aaKnown RBP21.41■■□□□ 1.02
SHMT1-202ENST00000352886 DENND4CQ5VZ89 1909 aa21.41■■□□□ 1.02
SHMT1-202ENST00000352886 FFAR3O14843 346 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 ANKRD28O15084 1053 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 GPR42O15529 346 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 ZNF821O75541 412 aaPredicted RBP21.4■■□□□ 1.02
SHMT1-202ENST00000352886 GABRR2P28476 465 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 RFC2P35250 354 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 SPAM1P38567 509 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 DYNC1I2Q13409 638 aaKnown RBP21.4■■□□□ 1.02
SHMT1-202ENST00000352886 PLA2G4EQ3MJ16 856 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 SEPHS2Q99611 448 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 ADI1Q9BV57 179 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 PTTG2Q9NZH5 202 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 OPTCQ9UBM4 332 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 CCL27Q9Y4X3 112 aa21.4■■□□□ 1.02
SHMT1-202ENST00000352886 KANSL1LA0AUZ9 987 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms