RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 LTB4R2Q9NPC1 389 aa10.78□□□□□ -0.68
ECM1-201ENST00000346569 CD93Q9NPY3 652 aa10.78□□□□□ -0.68
ECM1-201ENST00000346569 ARHGEF3Q9NR81 526 aa10.78□□□□□ -0.68
ECM1-201ENST00000346569 KCNK4Q9NYG8 393 aa10.78□□□□□ -0.68
ECM1-201ENST00000346569 USP36Q9P275 1121 aaKnown RBP10.78□□□□□ -0.68
ECM1-201ENST00000346569 DCTN4Q9UJW0 460 aa10.78□□□□□ -0.68
ECM1-201ENST00000346569 PTBP2Q9UKA9 531 aaKnown RBP10.78□□□□□ -0.68
ECM1-201ENST00000346569 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
ECM1-201ENST00000346569 OARD1Q9Y530 152 aa10.78□□□□□ -0.68
ECM1-201ENST00000346569 NUMA1Q14980 2115 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 TCRBV21S2A2A0A5A6 115 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 KANSL1LA0AUZ9 987 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 ERICH4A6NGS2 130 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 SUPT3HB4E1H0 165 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 MATN2O00339 956 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 RAD51BO15315 384 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 TAPBPO15533 448 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 GRID2O43424 1007 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 SUPT3HO75486 399 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 SIX3O95343 332 aaPredicted RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 MATN4O95460 622 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 HSPA4LO95757 839 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 RPS17P08708 135 aaKnown RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 GSTM1P09488 218 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 KITP10721 976 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 GFAPP14136 432 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 ACSL1P33121 698 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 RPL14P50914 215 aaKnown RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 ALDH18A1P54886 795 aaKnown RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 NAA20P61599 178 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 CDK3Q00526 305 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 GSTM4Q03013 218 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 IFT88Q13099 833 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 PCBP2Q15366 365 aaKnown RBP eCLIP10.77□□□□□ -0.68
ECM1-201ENST00000346569 CFAP157Q5JU67 520 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 MAVSQ7Z434 540 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 HEATR4Q86WZ0 1026 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 WDR75Q8IWA0 830 aaKnown RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 PDPRQ8NCN5 879 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 CCT6BQ92526 530 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 ELMO1Q92556 727 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 SHDQ96IW2 340 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 SIKE1Q9BRV8 207 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 TMEM120AQ9BXJ8 343 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 SLC12A9Q9BXP2 914 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 ZCCHC2Q9C0B9 1178 aaKnown RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 POLMQ9NP87 494 aaPredicted RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 C2orf42Q9NWW7 574 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 NUDT4Q9NZJ9 180 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 TMEM98Q9Y2Y6 226 aa10.77□□□□□ -0.68
ECM1-201ENST00000346569 DNMT3AQ9Y6K1 912 aaPredicted RBP10.77□□□□□ -0.68
ECM1-201ENST00000346569 WDFY4Q6ZS81 3184 aa10.77□□□□□ -0.69
ECM1-201ENST00000346569 DOCK9Q9BZ29 2069 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 A0A0G2JND7 137 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 FAM170BA6NMN3 283 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 PPP6CO00743 305 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 UBFD1O14562 309 aaKnown RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 SLC16A5O15375 505 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 FFAR2O15552 330 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 POP7O75817 140 aaKnown RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 SUPT7LO94864 414 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 FUCA1P04066 466 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 PCCBP05166 539 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 FGF4P08620 206 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 HOXC4P09017 264 aaPredicted RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 MPSTP25325 297 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 AGTR2P50052 363 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 HK2P52789 917 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 AQP5P55064 265 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 HNRNPH2P55795 449 aaKnown RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 PPP2CBP62714 309 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 PPP2CAP67775 309 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 CDKL1Q00532 357 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 DMTNQ08495 405 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 LRRC32Q14392 662 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 SETDB1Q15047 1291 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 IRF4Q15306 451 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 PHKG1Q16816 387 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 GALNTL6Q49A17 601 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 ANKS6Q68DC2 871 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 KIAA1324Q6UXG2 1013 aaKnown RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 TRPM8Q7Z2W7 1104 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 RAB44Q7Z6P3 723 aaPredicted RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 YTHDF3Q7Z739 585 aaKnown RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 TRIM69Q86WT6 500 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 LILRA3Q8N6C8 439 aaPredicted RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 FITM2Q8N6M3 262 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 OR2T34Q8NGX1 318 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 EXT2Q93063 718 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 RHBDF1Q96CC6 855 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 BTBD1Q9H0C5 482 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 STN1Q9H668 368 aaKnown RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 SGK2Q9HBY8 427 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 ZBTB26Q9HCK0 441 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 TNFRSF12AQ9NP84 129 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 CD274Q9NZQ7 290 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 MARCOQ9UEW3 520 aaPredicted RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 PDE10AQ9Y233 779 aa10.76□□□□□ -0.69
ECM1-201ENST00000346569 PCYT1BQ9Y5K3 369 aaPredicted RBP10.76□□□□□ -0.69
ECM1-201ENST00000346569 PRR23AA6NEV1 266 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms