RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 POF1BQ8WVV4 589 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 SLC22A4Q9H015 551 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 FKBP14Q9NWM8 211 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 ZDHHC7Q9NXF8 308 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 AHSPQ9NZD4 102 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 HEMK1Q9Y5R4 338 aaPredicted RBP15.3■□□□□ 0.04
SRPK1-201ENST00000346162 CICQ96RK0 1608 aaPredicted RBP15.3■□□□□ 0.04
SRPK1-201ENST00000346162 CCL22O00626 93 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 RPP40O75818 363 aaKnown RBP15.3■□□□□ 0.04
SRPK1-201ENST00000346162 ELP6Q0PNE2 266 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 MSS51Q4VC12 460 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 BRI3BPQ8WY22 251 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 PCYT2Q99447 389 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 NUP50Q9UKX7 468 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 PCDH8O95206 1070 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 OTCP00480 354 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 CHRNB1P11230 501 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 ENDOUP21128 410 aaKnown RBP15.3■□□□□ 0.04
SRPK1-201ENST00000346162 IGFBP5P24593 272 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 ALDH9A1P49189 494 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 HSF2Q03933 536 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 LIPEQ05469 1076 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 LCN1P1Q5VSP4 162 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 ZNF467Q7Z7K2 595 aaPredicted RBP15.3■□□□□ 0.04
SRPK1-201ENST00000346162 PHACTR4Q8IZ21 702 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 NTAN1Q96AB6 310 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 RPS6KA6Q9UK32 745 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 CEPT1Q9Y6K0 416 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 ADAMTSL3P82987 1691 aa15.3■□□□□ 0.04
SRPK1-201ENST00000346162 SNX4O95219 450 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 GPR15P49685 360 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 NDST2P52849 883 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 RPL38P63173 70 aaKnown RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 NCBP2-AS2Q69YL0 99 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 OR52B2Q96RD2 323 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 KLHL1Q9NR64 748 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 PIGVQ9NUD9 493 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 MYH7BA7E2Y1 1941 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 CXorf49A8MYA2 514 aaPredicted RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 ABCB7O75027 752 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 NCK1P16333 377 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 MATN1P21941 496 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 TAS2R39P59534 338 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 CYP4F8P98187 520 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 SKIV2LQ15477 1246 aaKnown RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 C14orf80Q86SX3 495 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 IGFN1Q86VF2 1251 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 CYP4Z2PQ8N1L4 340 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 FSTL5Q8N475 847 aaPredicted RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 ZNF557Q8N988 423 aaPredicted RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 ROPN1LQ96C74 230 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 PLK4O00444 970 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 C8BP07358 591 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 PKMP14618 531 aaKnown RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 PFKPQ01813 784 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 NOGQ13253 232 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 KCNJ11Q14654 390 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 SNAPC1Q16533 368 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 PLEKHG6Q3KR16 790 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 BORAQ6PGQ7 559 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 SCAMP5Q8TAC9 235 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 DENND1AQ8TEH3 1009 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 BTN2A2Q8WVV5 523 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 ALG2Q9H553 416 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 NKIRAS2Q9NYR9 191 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 ZNHIT2Q9UHR6 403 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 SNX6Q9UNH7 406 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 NUP98P52948 1817 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 TRAV19A0A0A6YYK7 116 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 C9JVG2 144 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 PRMT5O14744 637 aaPredicted RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 AXIN1O15169 862 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 RNASEH2AO75792 299 aaKnown RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 KDM4BO94953 1096 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 CCNYL3P0C7X3 344 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 TACR2P21452 398 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 GLDCP23378 1020 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 IL32P24001 234 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 VBP1P61758 197 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 DEFA5Q01523 94 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 SETMARQ53H47 684 aaPredicted RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 USP43Q70EL4 1123 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 RALGPS2Q86X27 583 aaPredicted RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 OR6K2Q8NGY2 324 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 BEX2Q9BXY8 128 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 XYLT2Q9H1B5 865 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 NFKBIL1Q9UBC1 381 aaPredicted RBP15.29■□□□□ 0.04
SRPK1-201ENST00000346162 ADGRE2Q9UHX3 823 aa15.29■□□□□ 0.04
SRPK1-201ENST00000346162 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
SRPK1-201ENST00000346162 CPSF6Q16630 551 aaKnown RBP eCLIP15.28■□□□□ 0.043e-17■□□□□ 8.4
SRPK1-201ENST00000346162 FAM151BQ6UXP7 276 aa15.28■□□□□ 0.04
SRPK1-201ENST00000346162 TRAPPC5Q8IUR0 188 aa15.28■□□□□ 0.04
SRPK1-201ENST00000346162 SCML4Q8N228 414 aa15.28■□□□□ 0.04
SRPK1-201ENST00000346162 FBXO27Q8NI29 283 aa15.28■□□□□ 0.04
SRPK1-201ENST00000346162 JPH3Q8WXH2 748 aaPredicted RBP15.28■□□□□ 0.04
SRPK1-201ENST00000346162 CCDC106Q9BWC9 280 aa15.28■□□□□ 0.04
SRPK1-201ENST00000346162 TRPC4Q9UBN4 977 aa15.28■□□□□ 0.04
SRPK1-201ENST00000346162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.28■□□□□ 0.04
SRPK1-201ENST00000346162 AQP12BA6NM10 295 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms