RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 CCT7Q99832 543 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 FAM126AQ9BYI3 521 aaPredicted RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 MKRN2Q9H000 416 aaKnown RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 SLC6A17Q9H1V8 727 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 EFCAB1Q9HAE3 211 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 SUN2Q9UH99 717 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 SIT1Q9Y3P8 196 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 COPG1Q9Y678 874 aaKnown RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 CKAP5Q14008 2032 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 LOC100653049A0A140TA62 436 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 EIF3FO00303 357 aaPredicted RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 UBFD1O14562 309 aaKnown RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 ENTPD5O75356 428 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 LEFTY1O75610 366 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 KRT34O76011 436 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 JUNP05412 331 aaKnown RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 HOXB2P14652 356 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 VIPR1P32241 457 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 PKNOX1P55347 436 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 SLC25A3Q00325 362 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 STX5Q13190 355 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 LRRC32Q14392 662 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 CCDC6Q16204 474 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 KANK2Q63ZY3 851 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 TSPAN33Q86UF1 283 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 ZBTB2Q8N680 514 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 DTX3LQ8TDB6 740 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 KLHL32Q96NJ5 620 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 COPS8Q99627 209 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 SLC30A3Q99726 388 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 CHRDQ9H2X0 955 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 LATS2Q9NRM7 1088 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 SPATS2LQ9NUQ6 558 aaKnown RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 GALPQ9UBC7 116 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 STOML1Q9UBI4 398 aa14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.95□□□□□ -0.02
TUBB4B-201ENST00000340384 A0A0U1RQS6 177 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 TSPAN11A1L157 253 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 TMEM221A6NGB7 291 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 M0R296 226 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 STK25O00506 426 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 CCNT2O60583 730 aaKnown RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 SLC25A14O95258 325 aaPredicted RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 SIX3O95343 332 aaPredicted RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 OR56A5P0C7T3 313 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 ITGAXP20702 1163 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 XPAP23025 273 aaPredicted RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 RPS9P46781 194 aaKnown RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 NUDT2P50583 147 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 CDH13P55290 713 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 SH3BP2P78314 561 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 ELAVL3Q14576 367 aaKnown RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 TGFBIQ15582 683 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 C1orf146Q5VVC0 180 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 DEFB107AQ8IZN7 70 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 GPR26Q8NDV2 337 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 TRPC4APQ8TEL6 797 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 TWIST2Q8WVJ9 160 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 JADE3Q92613 823 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 RSPH9Q9H1X1 276 aaPredicted RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 EPHX3Q9H6B9 360 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 KCTD5Q9NXV2 234 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 IL36AQ9UHA7 158 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 SLC7A8Q9UHI5 535 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 BCAP29Q9UHQ4 241 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 PCTPQ9UKL6 214 aa14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 G3BP2Q9UN86 482 aaKnown RBP14.94□□□□□ -0.02
TUBB4B-201ENST00000340384 A0A088AWK7 358 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 FKBP6O75344 327 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 TRIM16O95361 564 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 PSMG1O95456 288 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 UROSP10746 265 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 ENO3P13929 434 aaPredicted RBP14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 UGT1A6P19224 532 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 UGT1A1P22309 533 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 UGT1A4P22310 534 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 UGT1A3P35503 534 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 UGT1A5P35504 534 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 SPINT3P49223 89 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 DCDC1P59894 354 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 PTSQ03393 145 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 TBL3Q12788 808 aaKnown RBP14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 MTAPQ13126 283 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 ART3Q13508 389 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 E2F5Q15329 346 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 RBBP7Q16576 425 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 POM121L1PQ3SYA9 428 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 CLEC6AQ6EIG7 209 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 METTL2BQ6P1Q9 378 aaKnown RBP14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 RPS27LQ71UM5 84 aaKnown RBP14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 SYT13Q7L8C5 426 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 TRMT11Q7Z4G4 463 aaKnown RBP14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 MMAAQ8IVH4 418 aaKnown RBP14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 HGH1Q9BTY7 390 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 EBF2Q9HAK2 575 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 MRPL40Q9NQ50 206 aaKnown RBP14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 DKK3Q9UBP4 350 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 B4GALT6Q9UBX8 382 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 IKZF3Q9UKT9 509 aa14.93□□□□□ -0.02
TUBB4B-201ENST00000340384 ANGPTL2Q9UKU9 493 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms