RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 G3V2T6 193 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 MITFO75030 526 aaPredicted RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 DBTP11182 482 aaKnown RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 TYMPP19971 482 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 PTNP21246 168 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 LEPRP48357 1165 aaKnown RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 SLC11A1P49279 550 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 NUDT6P53370 316 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 INHBEP58166 350 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 HPCAP84074 193 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 SERINC3Q13530 473 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 GTF2H2Q13888 395 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 LRP8Q14114 963 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 ABRAXAS2Q15018 415 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 GTF2H2CQ6P1K8 395 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 LETMD1Q6P1Q0 360 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 RFLNAQ6ZTI6 216 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 SYTL1Q8IYJ3 562 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 ADGRG2Q8IZP9 1017 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 NKAPQ8N5F7 415 aaKnown RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 ASPSCR1Q9BZE9 553 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 TUBB1Q9H4B7 451 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 ZFYVE1Q9HBF4 777 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 ZDHHC7Q9NXF8 308 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 RAPGEFL1Q9UHV5 662 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 EPB42P16452 691 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 SLC6A4P31645 630 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 HK2P52789 917 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 PMS2P3Q13401 168 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 C11orf91Q3C1V1 193 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 C8orf59Q8N0T1 100 aaPredicted RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 MDGA1Q8NFP4 955 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 PANX1Q96RD7 426 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 FAM126AQ9BYI3 521 aaPredicted RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 RPF2Q9H7B2 306 aaKnown RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 CAPN10Q9HC96 672 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 A0A0G2JN53 185 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 ANKRD66B4E2M5 251 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 AOC2O75106 756 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 ANXA6P08133 673 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 CCDC159P0C7I6 412 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 CSKP41240 450 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 TTPAP49638 278 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 IRF8Q02556 426 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 IL10RBQ08334 325 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 IHHQ14623 411 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 MYBPC3Q14896 1274 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 AARS2Q5JTZ9 985 aaKnown RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 TSPAN33Q86UF1 283 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 SYT12Q8IV01 421 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 CNIH3Q8TBE1 160 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 FRS2Q8WU20 508 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 OSCP1Q8WVF1 389 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 HTRA1Q92743 480 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 SH3KBP1Q96B97 665 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 DPH2Q9BQC3 489 aaPredicted RBP11.76□□□□□ -0.53
USP1-201ENST00000339950 TTPALQ9BTX7 342 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 MARCH7Q9H992 704 aa11.76□□□□□ -0.53
USP1-201ENST00000339950 MTMR11A4FU01 709 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 DENRO43583 198 aaKnown RBP11.75□□□□□ -0.53
USP1-201ENST00000339950 SERPINA1P01009 418 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 CDH2P19022 906 aaPredicted RBP11.75□□□□□ -0.53
USP1-201ENST00000339950 GABRR2P28476 465 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 ERVPABLB-1P60509 514 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 ADRM1Q16186 407 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 RGS21Q2M5E4 152 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 CLLU1OSQ5K130 101 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 HMBOX1Q6NT76 420 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 ERMP1Q7Z2K6 904 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 FAM86B1Q8N7N1 296 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 IRGQQ8WZA9 623 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 SCAMP4Q969E2 229 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 EGLN2Q96KS0 407 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 CORO1BQ9BR76 489 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 PLGRKTQ9HBL7 147 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 TREX1Q9NSU2 369 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 SMIM30A4D0T7 59 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 ACOT8O14734 319 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 SMAD6O43541 496 aaKnown RBP11.75□□□□□ -0.53
USP1-201ENST00000339950 FAM20BO75063 409 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 ZNF26P17031 533 aaPredicted RBP11.75□□□□□ -0.53
USP1-201ENST00000339950 TNFRSF1BP20333 461 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 TRIP4Q15650 581 aaPredicted RBP11.75□□□□□ -0.53
USP1-201ENST00000339950 CHRNA6Q15825 494 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 CPQQ9Y646 472 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 ATG2BQ96BY7 2078 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 SLC38A8A6NNN8 435 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 KPNA3O00505 521 aaPredicted RBP11.75□□□□□ -0.53
USP1-201ENST00000339950 COX7A2P14406 83 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 AGXTP21549 392 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 PHKG1Q16816 387 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 GPR153Q6NV75 609 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 RGMBQ6NW40 437 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 TRAF7Q6Q0C0 670 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 RSPO2Q6UXX9 243 aaPredicted RBP11.75□□□□□ -0.53
USP1-201ENST00000339950 TAGAPQ8N103 731 aa11.75□□□□□ -0.53
USP1-201ENST00000339950 CLIP4Q8N3C7 705 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms