RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SCYL1Q96KG9 808 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 OR2M4Q96R27 311 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 COG4Q9H9E3 785 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ZSCAN32Q9NX65 697 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 TMEM216Q9P0N5 145 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC17A7Q9P2U7 560 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 EMCNQ9ULC0 261 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SUFUQ9UMX1 484 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC5A10A0PJK1 596 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SYCE1LA8MT33 242 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 BTN3A1O00481 513 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 DHRS4L1P0CG22 281 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 CHN1P15882 459 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PBLDP30039 288 aaPredicted RBP14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 DPP6P42658 865 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 GLRBP48167 497 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ATP1A2P50993 1020 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 AFF3P51826 1226 aaKnown RBP14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SRP54P61011 504 aaKnown RBP14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SP140Q13342 867 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 TUBB8Q3ZCM7 444 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ACSBG2Q5FVE4 666 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 TECRLQ5HYJ1 363 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 LYSMD4Q5XG99 296 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ISCA2Q86U28 154 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PARGQ86W56 976 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC22A18ASQ8N1D0 253 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 DEFB119Q8N690 84 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SREK1Q8WXA9 508 aaKnown RBP14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PDXPQ96GD0 296 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 CARS2Q9HA77 564 aaKnown RBP14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 CYP4F12Q9HCS2 524 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 TM9SF3Q9HD45 589 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ZNF358Q9NW07 568 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 XPR1Q9UBH6 696 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 GULP1Q9UBP9 304 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 MOSPD1Q9UJG1 213 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ACSL5Q9ULC5 683 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PCDHGA2Q9Y5H1 932 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PRR5-ARHGAP8B1AHC4 643 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 H3BM21 787 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 TK2O00142 265 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 BCAT2O15382 392 aaPredicted RBP14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 BIRC5O15392 142 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 ZBTB14O43829 449 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 KERAO60938 352 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 C8GP07360 202 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 GMPRP36959 345 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 BLKP51451 505 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 IL9RQ01113 521 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 ALG11Q2TAA5 492 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 PIWIL4Q7Z3Z4 852 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 SPATA6LQ8N4H0 392 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 CCDC63Q8NA47 563 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 ARMC2Q8NEN0 867 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 MDM1Q8TC05 714 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 DYDC1Q8WWB3 177 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 OR1E3Q8WZA6 343 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 CCDC126Q96EE4 140 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 ZC3H10Q96K80 434 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 MIR1-1HGQ9H1L0 117 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 TRNAU1APQ9NX07 287 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 SUSD2Q9UGT4 822 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 TMCO1Q9UM00 188 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 CDYLQ9Y232 598 aa14.25□□□□□ -0.13
NIPAL3-202ENST00000339255 TDRD6O60522 2096 aaKnown RBP14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 ARHGEF17Q96PE2 2063 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 A0A1W2PR77 199 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 VILLO15195 856 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 POLR3GO15318 223 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 RASGRP1O95267 797 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 FUCA1P04066 466 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 ENO2P09104 434 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 SP9P0CG40 484 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 MYL2P10916 166 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 ACP5P13686 325 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 GNSP15586 552 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 TAC1P20366 129 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 HOXD12P35452 270 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 GNPDA1P46926 289 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 SERPINB4P48594 390 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 WDR4P57081 412 aaKnown RBP14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 PPARDQ03181 441 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 ANGPT1Q15389 498 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 TEAD4Q15561 434 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 TSNQ15631 228 aaKnown RBP14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 TPRG1LQ5T0D9 272 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 METRNLQ641Q3 311 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 CFAP206Q8IYR0 622 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 ZBTB44Q8NCP5 570 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 MGARPQ8TDB4 240 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 SKA2Q8WVK7 121 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 PTERQ96BW5 349 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 FOPNLQ96NB1 174 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 ALG9Q9H6U8 611 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 COPG2Q9UBF2 871 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 FAM8A1Q9UBU6 413 aa14.24□□□□□ -0.13
NIPAL3-202ENST00000339255 RNF112Q9ULX5 631 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms