RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 KCTD11Q693B1 232 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 CAPRIN2Q6IMN6 1127 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 PWWP2BQ6NUJ5 590 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 NAPRTQ6XQN6 538 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 PEX26Q7Z412 305 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 PRSS42Q7Z5A4 293 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 OR4E2Q8NGC2 313 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 STARD8Q92502 1023 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 KIAA1143Q96AT1 154 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 BAG1Q99933 345 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 ZCCHC2Q9C0B9 1178 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 SMOXQ9NWM0 555 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 SLC24A2Q9UI40 661 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 LNPEPQ9UIQ6 1025 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 CRLS1Q9UJA2 301 aa13.05□□□□□ -0.32
NUDCD3-201ENST00000338427 OR51F1A6NGY5 319 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 CYSRT1A8MQ03 144 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 AGAP14A8MT82 685 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 TERTO14746 1132 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 WISP1O95388 367 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 TCN2P20062 427 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 NR1D1P20393 614 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 MC4RP32245 332 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 CCR10P46092 362 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 KCNC4Q03721 635 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 CDC20Q12834 499 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 KCNAB2Q13303 367 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 POU6F1Q14863 301 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 GPR19Q15760 415 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 ZRANB3Q5FWF4 1079 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 TAS2R42Q7RTR8 314 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 SERPINA9Q86WD7 417 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 RBM12BQ8IXT5 1001 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 KLHDC8BQ8IXV7 354 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 PIANPQ8IYJ0 282 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 NXPE1Q8N323 547 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 ESX1Q8N693 406 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 CLDN19Q8N6F1 224 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 SIDT2Q8NBJ9 832 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 ATG4AQ8WYN0 398 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 DCUN1D1Q96GG9 259 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 SLC41A2Q96JW4 573 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 FERD3LQ96RJ6 166 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 TMEM121Q9BTD3 319 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 RAB33BQ9H082 229 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 ARNT2Q9HBZ2 717 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 SEMA5BQ9P283 1151 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 PRSS21Q9Y6M0 314 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 SPTBP11277 2137 aa13.04□□□□□ -0.32
NUDCD3-201ENST00000338427 OR5K3A6NET4 321 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 STK10O94804 968 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 IPO7O95373 1038 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 CRTAMO95727 393 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 ATP1B2P14415 290 aaPredicted RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 ETS1P14921 441 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 CETN2P41208 172 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 KPNA2P52292 529 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 PRKG2Q13237 762 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 KLF1Q13351 362 aaPredicted RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 IL11RAQ14626 422 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 BCL7AQ4VC05 210 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 CCDC38Q502W7 563 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 LCN10Q6JVE6 187 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 ARHGEF18Q6ZSZ5 1173 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 SNX20Q7Z614 316 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 PPP1R3BQ86XI6 285 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 SLC35B2Q8TB61 432 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 CT55Q8WUE5 264 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 ABHD17AQ96GS6 310 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 CDKN2AIPNLQ96HQ2 116 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 LINC00615Q96LM1 132 aaPredicted RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 KLHL25Q9H0H3 589 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 TRIT1Q9H3H1 467 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 XKR8Q9H6D3 395 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 ZDHHC3Q9NYG2 299 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 ACSL5Q9ULC5 683 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 PADI1Q9ULC6 663 aa13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 ZNF106Q9H2Y7 1883 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-201ENST00000338427 SETXQ7Z333 2677 aaKnown RBP13.02□□□□□ -0.32
NUDCD3-201ENST00000338427 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 SLC9B1P1A6NJY1 282 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 BTN3A3O00478 584 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 PTMAP06454 111 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 GRIA1P42261 906 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 PREPP48147 710 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 RPS18P62269 152 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 TUBB3Q13509 450 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 SEPT6Q14141 434 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 KRT33BQ14525 404 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 BRD3Q15059 726 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 IGFBP7Q16270 282 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 ZNF658BQ4V348 819 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 DNTTIP2Q5QJE6 756 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 FAM69BQ5VUD6 431 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 ATG14Q6ZNE5 492 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 SLC38A9Q8NBW4 561 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 OR52K1Q8NGK4 314 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms