RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PIGHQ14442 188 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 HLXQ14774 488 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ARHGAP19Q14CB8 494 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TCHHL1Q5QJ38 904 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 COX20Q5RI15 118 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 RUSC1-AS1Q66K80 236 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TIGD7Q6NT04 549 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CASC4Q6P4E1 433 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 IYDQ6PHW0 289 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 METAP1DQ6UB28 335 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 LCLAT1Q6UWP7 414 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 DPPA2Q7Z7J5 298 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ADGRG6Q86SQ4 1221 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NLRP14Q86W24 1093 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 KIR3DL3Q8N743 410 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF366Q8N895 744 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 OR56A4Q8NGH8 313 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 STT3BQ8TCJ2 826 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ELP5Q8TE02 316 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 SLC20A1Q8WUM9 679 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 PGM2Q96G03 612 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NOX5Q96PH1 765 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TM9SF2Q99805 663 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 EIF2AK1Q9BQI3 630 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 LXNQ9BS40 222 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 MCRIP2Q9BUT9 160 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NUDT9Q9BW91 350 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 MMRN2Q9H8L6 949 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 DPP3Q9NY33 737 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TLR7Q9NYK1 1049 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 SEC14L3Q9UDX4 400 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CGGBP1Q9UFW8 167 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 POLG2Q9UHN1 485 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 EIF2B4Q9UI10 523 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 GLS2Q9UI32 602 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 PTGDR2Q9Y5Y4 395 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 FHOD1Q9Y613 1164 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TLN1Q9Y490 2541 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 APOBP04114 4563 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 KMT2CQ8NEZ4 4911 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 IGHV1-45A0A0A0MS14 117 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 GTPBP10A4D1E9 387 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 FAM149AA5PLN7 773 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ARHGEF35A5YM69 484 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 KRTAP29-1A8MX34 341 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 GOLIM4O00461 696 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CLDN5O00501 218 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CTIFO43310 598 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TNFRSF21O75509 655 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CKMP06732 381 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NGFRP08138 427 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 KRT7P08729 469 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 FAM87AP0C7U9 286 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CYP2A6P11509 494 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 PCSK2P16519 638 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 PTPN1P18031 435 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 U2AF2P26368 475 aaKnown RBP eCLIP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 SERPINB1P30740 379 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CD96P40200 585 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 SLC26A3P40879 764 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 EEFSECP57772 596 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 RPS4XP62701 263 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 RPP38P78345 283 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CTBP1Q13363 440 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 FAM53BQ14153 422 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 GBX1Q14549 363 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CDKN3Q16667 212 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 P3H1Q32P28 736 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 SLC9B1Q4ZJI4 515 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 VWA3BQ502W6 1294 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 CARD16Q5EG05 197 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 MDH1BQ5I0G3 518 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NCEH1Q6PIU2 408 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ESPNLQ6ZVH7 1005 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 SCD5Q86SK9 330 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 DAW1Q8N136 415 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 GALNT16Q8N428 558 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ATP6V0D2Q8N8Y2 350 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ANKRD52Q8NB46 1076 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NUP37Q8NFH4 326 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 TOR1AIP2Q8NFQ8 470 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 OR2K2Q8NGT1 345 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 HASPINQ8TF76 798 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NEU4Q8WWR8 484 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ITPKCQ96DU7 683 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 RBMXL1Q96E39 390 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 PELOQ9BRX2 385 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 GTPBP2Q9BX10 602 aaKnown RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 STK33Q9BYT3 514 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 KCNN2Q9H2S1 579 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 KCNJ16Q9NPI9 418 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 MKKSQ9NPJ1 570 aaPredicted RBP1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ABCF3Q9NUQ8 709 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 PCMTD2Q9NV79 361 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 LRIT1Q9P2V4 623 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 ADAM21Q9UKJ8 722 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 MAN1B1Q9UKM7 699 aa1.49□□□□□ -2.17
LINC00643-201ENST00000334389 NOB1Q9ULX3 412 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms