RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SENP3-EIF4A1A0A087X0R7 540 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF701M0R085 212 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR2B3O76000 313 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PEA15Q15121 130 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC22A10Q63ZE4 541 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PAMR1Q6UXH9 720 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 DUS3LQ96G46 650 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SCLYQ96I15 445 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 BEX2Q9BXY8 128 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 UCK2Q9BZX2 261 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 LRMDAQ9H2I8 198 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF219Q9P2Y4 722 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ANKUB1A6NFN9 424 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 A8MXE2 369 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 RPP40O75818 363 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 HTR3BO95264 441 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CDK1P06493 297 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 C8AP07357 584 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 DIO1P49895 249 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TPMTP51580 245 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 GPR85P60893 370 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CCNIQ14094 377 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ARHGAP40Q5TG30 622 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CLEC10AQ8IUN9 316 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 RP9Q8TA86 221 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CA5BP1Q8WTZ4 195 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 HTRA1Q92743 480 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CMBLQ96DG6 245 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TCF25Q9BQ70 676 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ANKRA2Q9H9E1 313 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 GLOD4Q9HC38 313 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 LMBRD1Q9NUN5 540 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 NLE1Q9NVX2 485 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 NUFIP1Q9UHK0 495 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MDFIC2A0A1B0GVS7 189 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A1W2PRV1 198 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 FAM166BA8MTA8 275 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CSTAP01040 98 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MT-ND4P03905 459 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 GPSM2P81274 684 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ITPK1Q13572 414 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MTHFSDQ2M296 383 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TMPRSS11AQ6ZMR5 421 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ABHD12BQ7Z5M8 362 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PPIL6Q8IXY8 311 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TFGQ92734 400 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 HARBI1Q96MB7 349 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SPATA13Q96N96 652 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SAMD10Q9BYL1 202 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 NXF2Q9GZY0 626 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 POLR3FQ9H1D9 316 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PTGES2Q9H7Z7 377 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 C12orf10Q9HB07 376 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF358Q9NW07 568 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TMEM98Q9Y2Y6 226 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 YARS2Q9Y2Z4 477 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 YTHDF2Q9Y5A9 579 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TNS3Q68CZ2 1445 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 A0A0D9SFI3 127 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR7A17O14581 309 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SFTPBP07988 381 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MLNP12872 115 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 RPS6KB1P23443 525 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MAP2K4P45985 399 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 FUT11Q495W5 492 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PDSS1Q5T2R2 415 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 UNC5BQ8IZJ1 945 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 OR10A6Q8NH74 314 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SPACA7Q96KW9 195 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PLEKHF1Q96S99 279 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MICU1Q9BPX6 476 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 LGR4Q9BXB1 951 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 FRMD8P1Q9BZ68 369 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 GLTPQ9NZD2 209 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 SARDHQ9UL12 918 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MAN2B2Q9Y2E5 1009 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 H0YAE9 185 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 H3BNH8 94 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PTBP3O95758 552 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 THP07101 528 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PRKACGP22612 351 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CSTF1Q05048 431 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 PPP3CAQ08209 521 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 RAB41Q5JT25 222 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 FIGNL1Q6PIW4 674 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 CARFQ8N187 725 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 RAB42Q8N4Z0 105 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 KCT2Q8NC54 265 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ELP4Q96EB1 424 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 TMA16Q96EY4 203 aaKnown RBP6□□□□□ -1.45
CDC42BPA-201ENST00000334218 AMDHD1Q96NU7 426 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF649Q9BS31 505 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MANSC1Q9H8J5 431 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 DIP2CQ9Y2E4 1556 aa6□□□□□ -1.45
CDC42BPA-201ENST00000334218 MRASO14807 208 aa5.99□□□□□ -1.45
CDC42BPA-201ENST00000334218 PGAM2P15259 253 aa5.99□□□□□ -1.45
CDC42BPA-201ENST00000334218 USP6P35125 1406 aa5.99□□□□□ -1.45
CDC42BPA-201ENST00000334218 PCGF2P35227 344 aa5.99□□□□□ -1.45
CDC42BPA-201ENST00000334218 ADH7P40394 386 aa5.99□□□□□ -1.45
CDC42BPA-201ENST00000334218 SEC24CP53992 1094 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms