RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 SLC27A5Q9Y2P5 690 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TRAF6Q9Y4K3 522 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CR1P17927 2039 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TTC24A2A3L6 582 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 DDX39AO00148 427 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 KIAA0355O15063 1070 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 EDF1O60869 148 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 GPR32O75388 356 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SPAG7O75391 227 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CRTAPO75718 401 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 RGS9O75916 674 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 PCDH8O95206 1070 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ZBTB11O95625 1053 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 SNAI1O95863 264 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 TRIM49P0CI25 452 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TRIM49CP0CI26 452 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TIMP2P16035 220 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TNNI3P19429 210 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CFPP27918 469 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 PXNP49023 591 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 FMO5P49326 533 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 GBX2P52951 348 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 CDK16Q00536 496 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 FPGSQ05932 587 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 PPIL2Q13356 520 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 PEX6Q13608 980 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SOWAHAQ2M3V2 549 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ARMCX4Q5H9R4 360 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SH3D19Q5HYK7 790 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 EEF1DP3Q658K8 133 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ERAP2Q6P179 960 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 PROSER1Q86XN7 944 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 LIX1Q8N485 282 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 KIF2BQ8N4N8 673 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SLC35F5Q8WV83 523 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 LRRC39Q96DD0 335 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 PGAP3Q96FM1 320 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 ZDHHC12Q96GR4 267 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CNDP2Q96KP4 475 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 TMEM74Q96NL1 305 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 MROH8Q9H579 483 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 POLR1BQ9H9Y6 1135 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TMEM165Q9HC07 324 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 EML4Q9HC35 981 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 PI4K2BG5E9Z4 385 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 H0Y3Z8 333 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TERTO14746 1132 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 SULT1B1O43704 296 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CHP2O43745 196 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 NTN1O95631 604 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 WDPCPO95876 746 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CDK1P06493 297 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 C6orf222P0C671 652 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 DLATP10515 647 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 CR2P20023 1033 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 MCM3P25205 808 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 GRK4P32298 578 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 RTP1P59025 263 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CDK3Q00526 305 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ATP1A4Q13733 1029 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ABCB5Q2M3G0 1257 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 RBM20Q5T481 1227 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 AHSA2Q719I0 299 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ATCAYQ86WG3 371 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CARM1Q86X55 608 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 C10orf107Q8IVU9 208 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SPATA6LQ8N4H0 392 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SIMC1Q8NDZ2 872 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 CATSPER1Q8NEC5 780 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TBC1D15Q8TC07 691 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 PNPT1Q8TCS8 783 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 FIG4Q92562 907 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TIFAQ96CG3 184 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SENP5Q96HI0 755 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 RSRC1Q96IZ7 334 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 TRIM47Q96LD4 638 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 HGH1Q9BTY7 390 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TBC1D10AQ9BXI6 508 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 NFKBIZQ9BYH8 718 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 INO80BQ9C086 356 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 ROGDIQ9GZN7 287 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 GSTO2Q9H4Y5 243 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 GPAMQ9HCL2 828 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ZCCHC3Q9NUD5 404 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 SETD4Q9NVD3 440 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 TMEM9Q9P0T7 183 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 GPN3Q9UHW5 284 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 TRHDEQ9UKU6 1024 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 ZMIZ1Q9ULJ6 1067 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.56□□□□□ -2
RGPD6-201ENST00000329516 ZNF175Q9Y473 711 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 IFITM10A6NMD0 228 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 PITPNM1O00562 1244 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 B4GAT1O43505 415 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 MRPS14O60783 128 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 KLF8O95600 359 aaPredicted RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 NUDT3O95989 172 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 EIF2S1P05198 315 aaKnown RBP2.56□□□□□ -2
RGPD6-201ENST00000329516 RB1P06400 928 aa2.56□□□□□ -2
RGPD6-201ENST00000329516 GSTT2P0CG29 244 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms