RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 DENND5BQ6ZUT9 1274 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 LRRTM1Q86UE6 522 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 CEP97Q8IW35 865 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 LSMEM2Q8N112 164 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 OR8K5Q8NH50 307 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 SEMA6AQ9H2E6 1030 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 RNF186Q9NXI6 227 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 SLC13A4Q9UKG4 626 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 SLC7A7Q9UM01 511 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 MOB4Q9Y3A3 225 aa2.54□□□□□ -2
CBX3P1-201ENST00000325243 NPIPB15A6NHN6 443 aaPredicted RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 J3QR06 171 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 ZNF197O14709 1029 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 TMCC2O75069 709 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 NDUFS3O75489 264 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 H1F0P07305 194 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 DUX4L4P0CJ87 422 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 ACADLP28330 430 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 CDC25CP30307 473 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 HARS2P49590 506 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 LRMPQ12912 555 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 GPR17Q13304 367 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 NAB2Q15742 525 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 FASTKD1Q53R41 847 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 IL27RAQ6UWB1 636 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 GPRIN3Q6ZVF9 776 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 ZNF584Q8IVC4 421 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 CRYBG2Q8N1P7 616 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 ZNF383Q8NA42 475 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 TMEM178AQ8NBL3 297 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 TMEM116Q8NCL8 245 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 OR2T11Q8NH01 316 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 ZFAND2BQ8WV99 257 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 MAGED4Q96JG8 741 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 GPATCH1Q9BRR8 931 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 AGXT2Q9BYV1 514 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 PAIP1Q9H074 479 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 P2RY12Q9H244 342 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 PPCSQ9HAB8 311 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 WASH6PQ9NQA3 447 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 MBNL1Q9NR56 388 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 OLFML3Q9NRN5 406 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 EPHA6Q9UF33 1036 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 LRWD1Q9UFC0 647 aa2.53□□□□□ -2
CBX3P1-201ENST00000325243 LIMA1Q9UHB6 759 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 DBNLQ9UJU6 430 aaKnown RBP2.53□□□□□ -2
CBX3P1-201ENST00000325243 MYH15Q9Y2K3 1946 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 TMEM8BA6NDV4 472 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 RRN3P2A6NIE6 340 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 TMEM189-UBE2V1I3L0A0 370 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 DNM1LO00429 736 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 ATP6V0E1O15342 81 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 CREB3O43889 395 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 CDC123O75794 336 aaPredicted RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 EIF3JO75822 258 aaKnown RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 HIST1H2ABP04908 130 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 HIST1H2ADP20671 130 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 PTGER3P43115 390 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 CDH11P55287 796 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 RPS18P62269 152 aaKnown RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 CEBPZQ03701 1054 aaKnown RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 LGALS3BPQ08380 585 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 UBE2V1Q13404 147 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 HNRNPDQ14103 355 aaKnown RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 RRS1Q15050 365 aaKnown RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 C2CD6Q53TS8 623 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 SLC25A30Q5SVS4 291 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 CYP4A22Q5TCH4 519 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 ZDHHC20Q5W0Z9 365 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 KLC3Q6P597 504 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 Q6ZR54 194 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 HIST3H2AQ7L7L0 130 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 GSDMBQ8TAX9 411 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 HPSE2Q8WWQ2 592 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 HSD17B8Q92506 261 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 SLC22A12Q96S37 553 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 DENND2DQ9H6A0 471 aaPredicted RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 INTS9Q9NV88 658 aaKnown RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 MIOSQ9NXC5 875 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 RRN3Q9NYV6 651 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 TSPYL4Q9UJ04 414 aa2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 R3HDM2Q9Y2K5 976 aaKnown RBP2.52□□□□□ -2.01
CBX3P1-201ENST00000325243 ASTN2O75129 1339 aaPredicted RBP2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 IGLV3-10A0A075B6K4 115 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 XBP1P17861 261 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 UGT1A4P22310 534 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 HNF4AP41235 474 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 MAGEA11P43364 429 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 TUBP50607 506 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 GPR143P51810 404 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 TRA2BP62995 288 aaKnown RBP2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 CDR2Q01850 454 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 NIPAL4Q0D2K0 466 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 RAPSNQ13702 412 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 MEP1AQ16819 746 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 SGSM1Q2NKQ1 1148 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 ACAD10Q6JQN1 1059 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 CNTROBQ8N137 903 aa2.51□□□□□ -2.01
CBX3P1-201ENST00000325243 TSPYL6Q8N831 410 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms