RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ABHD8Q96I13 439 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 SLC29A1Q99808 456 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 TRIM8Q9BZR9 551 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 SMOXQ9NWM0 555 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 VPS4AQ9UN37 437 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 KCNE2Q9Y6J6 123 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 BTAF1O14981 1849 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 STX16O14662 325 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 SGTAO43765 313 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 G6PDP11413 515 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 OLR1P78380 273 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 SPIBQ01892 262 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 SKIV2LQ15477 1246 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ANXA8L1Q5VT79 327 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 TRIM74Q86UV6 250 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 TRIM73Q86UV7 250 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 UMODL1-AS1Q8N2C9 162 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 TTC29Q8NA56 475 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 SMG8Q8ND04 991 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 NLGN2Q8NFZ4 835 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 EEF1AKMT1Q8WVE0 214 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 CLP1Q92989 425 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 DNAJC11Q9NVH1 559 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 TMEM248Q9NWD8 314 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 RAPGEFL1Q9UHV5 662 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 SCML2Q9UQR0 700 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 A0A0U1RQF3 1178 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 FPGTO14772 594 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 ERN1O75460 977 aaKnown RBP14.52□□□□□ -0.08
TCOF1-201ENST00000323668 SNAP29O95721 258 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 TRBC1P01850 177 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 ASGR1P07306 291 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 PABPC1P11940 636 aaKnown RBP14.52□□□□□ -0.08
TCOF1-201ENST00000323668 PCSK2P16519 638 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 ALDH4A1P30038 563 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 MYBPC1Q00872 1141 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 C6orf136Q5SQH8 315 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 CPTPQ5TA50 214 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 CHST15Q7LFX5 561 aaPredicted RBP14.52□□□□□ -0.08
TCOF1-201ENST00000323668 TMEM199Q8N511 208 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 CAPSLQ8WWF8 208 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 BRI3BPQ8WY22 251 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 KCNN1Q92952 543 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 C1orf74Q96LT6 269 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 PRRG3Q9BZD7 231 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 ZCCHC2Q9C0B9 1178 aaKnown RBP14.52□□□□□ -0.08
TCOF1-201ENST00000323668 RPF2Q9H7B2 306 aaKnown RBP14.52□□□□□ -0.08
TCOF1-201ENST00000323668 MIOSQ9NXC5 875 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 TNRC6CQ9HCJ0 1690 aaKnown RBP14.52□□□□□ -0.08
TCOF1-201ENST00000323668 A0A1B0GVG6 124 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 K7EPI3 171 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 SOCS2O14508 198 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 SNPHO15079 494 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 TFAP2AP05549 437 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 COL6A1P12109 1028 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 IL12AP29459 219 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 CDKL1Q00532 357 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 ELP6Q0PNE2 266 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 ABRQ12979 859 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 SERINC3Q13530 473 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 USP41Q3LFD5 358 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 DEFB128Q7Z7B8 93 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 FIBCD1Q8N539 461 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 ACVR1CQ8NER5 493 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 DNAJB8Q8NHS0 232 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 CSGALNACT1Q8TDX6 532 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 TAMM41Q96BW9 452 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 MUS81Q96NY9 551 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 MARCH4Q9P2E8 410 aaPredicted RBP14.52□□□□□ -0.08
TCOF1-201ENST00000323668 RIMS3Q9UJD0 308 aa14.52□□□□□ -0.08
TCOF1-201ENST00000323668 DLEC1Q9Y238 1755 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 ATXN8OSP0DMR3 200 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 ZNF182P17025 639 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-201ENST00000323668 SLC6A2P23975 617 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 SPAM1P38567 509 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 ALFQ53S48 1182 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 ISCA2Q86U28 154 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 PIK3C3Q8NEB9 887 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 KHSRPQ92945 711 aaKnown RBP eCLIP14.52□□□□□ -0.09
TCOF1-201ENST00000323668 ERGIC3Q9Y282 383 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 PTGDR2Q9Y5Y4 395 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 MYL12AP19105 171 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 ARSDP51689 593 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 MED22Q15528 200 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 PDCD4Q53EL6 469 aaKnown RBP14.52□□□□□ -0.09
TCOF1-201ENST00000323668 TRIM40Q6P9F5 258 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 FBXL19Q6PCT2 694 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 MAVSQ7Z434 540 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 HTRA1Q92743 480 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 PEX13Q92968 403 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 CYP2S1Q96SQ9 504 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 KAT8Q9H7Z6 458 aaKnown RBP14.52□□□□□ -0.09
TCOF1-201ENST00000323668 GIN1Q9NXP7 522 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 GMEB1Q9Y692 573 aa14.52□□□□□ -0.09
TCOF1-201ENST00000323668 hCG_2039718K7EN88 272 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 AURKAO14965 403 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 RASAL1O95294 804 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 GGT5P36269 586 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 CDKN2DP55273 166 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 SH3BP2P78314 561 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms