RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TRIT1Q9H3H1 467 aaKnown RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 GORASP2Q9H8Y8 452 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 AGO3Q9H9G7 860 aaKnown RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 SYTL2Q9HCH5 934 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 NUDT5Q9UKK9 219 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 PCDHGB1Q9Y5G3 927 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 PCDHGA10Q9Y5H3 936 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 BTN3A1O00481 513 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 TBX1O43435 398 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 MLYCDO95822 493 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 NTRK1P04629 796 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 CYP11A1P05108 521 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 PIRTP0C851 137 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 CYP4B1P13584 511 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 HOXB8P17481 243 aaPredicted RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 FMO4P31512 558 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 RYKP34925 604 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 DCTP40126 519 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 SUOXP51687 545 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 DMPKQ09013 629 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 SIM2Q14190 667 aaPredicted RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 CLCA4Q14CN2 919 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 TXNDC11Q6PKC3 985 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 PRR23BQ6ZRT6 265 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 NEK10Q6ZWH5 1172 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 C14orf80Q86SX3 495 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 DCP2Q8IU60 420 aaKnown RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 RTL3Q8N8U3 475 aaKnown RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 OR13C4Q8NGS5 318 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 LGALS12Q96DT0 336 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 AARSD1Q9BTE6 412 aaKnown RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 SLIRPQ9GZT3 109 aaKnown RBP17.63■□□□□ 0.41
PRKCB-202ENST00000321728 SP140LQ9H930 580 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 CATSPERZQ9NTU4 200 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.63■□□□□ 0.416e-7■■■□□ 15
PRKCB-202ENST00000321728 VAPAQ9P0L0 249 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 PCTPQ9UKL6 214 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 IPPQ9Y573 584 aa17.63■□□□□ 0.41
PRKCB-202ENST00000321728 E9PAM4 449 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 IRAK2O43187 625 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 MITFO75030 526 aaPredicted RBP17.62■□□□□ 0.41
PRKCB-202ENST00000321728 NDST3O95803 873 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 MAGP20916 626 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 EIF2DP41214 584 aaKnown RBP17.62■□□□□ 0.41
PRKCB-202ENST00000321728 LHX1P48742 406 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 RAD51Q06609 339 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 CDC20Q12834 499 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 XKR4Q5GH76 650 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 Q6ZSR9 355 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 OR56A4Q8NGH8 313 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 OR5K1Q8NHB7 308 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 DNAJB3Q8WWF6 145 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 TXNDC15Q96J42 360 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 BTBD2Q9BX70 525 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 HOXD1Q9GZZ0 328 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 POPDC3Q9HBV1 291 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 FBXO10Q9UK96 956 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 TPRKBQ9Y3C4 175 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 H0Y626 953 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 RFPL2O75678 378 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 UPK1BO75841 260 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 TRIM16O95361 564 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 MMP2P08253 660 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 PFKLP17858 780 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 HOXC13P31276 330 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 PAN2Q504Q3 1202 aaKnown RBP17.62■□□□□ 0.41
PRKCB-202ENST00000321728 MANEALQ5VSG8 457 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 CYP20A1Q6UW02 462 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 DNAJC14Q6Y2X3 702 aaPredicted RBP17.62■□□□□ 0.41
PRKCB-202ENST00000321728 UTS2BQ765I0 119 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 B3GNT8Q7Z7M8 397 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 LYSMD2Q8IV50 215 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 SCAMP5Q8TAC9 235 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 FUBP1Q96AE4 644 aaKnown RBP17.62■□□□□ 0.41
PRKCB-202ENST00000321728 ZHX1-C8orf76Q96EF9 292 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 DERL2Q9GZP9 239 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 EIF2B4Q9UI10 523 aaKnown RBP17.62■□□□□ 0.41
PRKCB-202ENST00000321728 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
PRKCB-202ENST00000321728 PARNO95453 639 aaKnown RBP17.61■□□□□ 0.41
PRKCB-202ENST00000321728 S100BP04271 92 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-202ENST00000321728 PTPN2P17706 415 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 CD6P30203 668 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 IFITM2Q01629 132 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 VAC14Q08AM6 782 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 LRIT3Q3SXY7 679 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 PRAMEF19Q5SWL8 479 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 DET1Q7L5Y6 550 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 OR8J3Q8NGG0 315 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 OR4L1Q8NH43 312 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 MYLPFQ96A32 169 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 CCDC115Q96NT0 180 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 TP63Q9H3D4 680 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-202ENST00000321728 RIBC2Q9H4K1 309 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 SCN3BQ9NY72 215 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 TAS2R13Q9NYV9 303 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 POLR3HQ9Y535 204 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-202ENST00000321728 GRXCR2A6NFK2 248 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 SLC16A6O15403 523 aa17.61■□□□□ 0.41
PRKCB-202ENST00000321728 NDUFB5O43674 189 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms