RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 AMBNQ9NP70 447 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 FBXO8Q9NRD0 319 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 TBC1D14Q9P2M4 693 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 DNAJB9Q9UBS3 223 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF225Q9UK10 706 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 PCDHB14Q9Y5E9 798 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 MYLKQ15746 1914 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 MCM3APO60318 1980 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 NOTOA8MTQ0 251 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 EFCAB9A8MZ26 197 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 BTN3A1O00481 513 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 ECI2O75521 394 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 UPK1BO75841 260 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 KRT8P05787 483 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 SLC2A3P11169 496 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 FMO4P31512 558 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 PIK3CGP48736 1102 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 GMPSP49915 693 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 HTR6P50406 440 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 ST13P50502 369 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 PHC1P78364 1004 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 MRPS15P82914 257 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 GTDC1Q4AE62 458 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 C6orf136Q5SQH8 315 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 DLEU7Q6UYE1 221 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 GCNT7Q6ZNI0 430 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 AHSA2Q719I0 299 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 OR52B6Q8NGF0 335 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 PYCR2Q96C36 320 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 ATOH8Q96SQ7 321 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 RBM4BQ9BQ04 359 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 RBM4Q9BWF3 364 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 BTBD2Q9BX70 525 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 REXO4Q9GZR2 422 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 DCSTAMPQ9H295 470 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 FAM124BQ9H5Z6 455 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 THG1LQ9NWX6 298 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 EIF2B4Q9UI10 523 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 POLR3HQ9Y535 204 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 ORC6Q9Y5N6 252 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 LOC100506127A0A0U1RQW1 187 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 H0Y626 953 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 J3KR12 359 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 RHOBTB1O94844 696 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 TRIM16O95361 564 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 DNTTP04053 509 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 GGT1P19440 569 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 EPHA2P29317 976 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 CD6P30203 668 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 DCTP40126 519 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 CASP3P42574 277 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 GABARAPL2P60520 117 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 SLC10A7Q0GE19 358 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 IHHQ14623 411 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 TTLL4Q14679 1199 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 NR6A1Q15406 480 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 DCAF4L1Q3SXM0 396 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 PAN2Q504Q3 1202 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 RGMBQ6NW40 437 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 EID3Q8N140 333 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 LILRB4Q8NHJ6 448 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 TRIB2Q92519 343 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 FCRL2Q96LA5 508 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 ZNF583Q96ND8 569 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 ZNF300Q96RE9 604 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 RNF167Q9H6Y7 350 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 TXNRD2Q9NNW7 524 aa9.52□□□□□ -0.89
PTPRA-202ENST00000318266 SARS2Q9NP81 518 aaKnown RBP9.52□□□□□ -0.89
PTPRA-202ENST00000318266 FAM234BA2RU67 622 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 H3BRB1 525 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 CACNG3O60359 315 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 PAGE1O75459 146 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 SLC10A3P09131 477 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 TIAL1Q01085 375 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPRA-202ENST00000318266 KCTD2Q14681 263 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 PTGR1Q14914 329 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 COQ5Q5HYK3 327 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 ZNF691Q5VV52 312 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 IL27RAQ6UWB1 636 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 CCBE1Q6UXH8 406 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-202ENST00000318266 SPATA19Q7Z5L4 167 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 C2orf69Q8N8R5 385 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 ATP6V0D2Q8N8Y2 350 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 CLHC1Q8NHS4 586 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 SCAMP5Q8TAC9 235 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 PROX1Q92786 737 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 CLIP3Q96DZ5 547 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 TSGA13Q96PP4 275 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 TMEM209Q96SK2 561 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 UGT2B28Q9BY64 529 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 PARVBQ9HBI1 364 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 NECTIN3Q9NQS3 549 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 SMPD4Q9NXE4 827 aa9.51□□□□□ -0.89
PTPRA-202ENST00000318266 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.894e-8■■■■□ 19.8
PTPRA-202ENST00000318266 UXTQ9UBK9 157 aaPredicted RBP9.51□□□□□ -0.89
PTPRA-202ENST00000318266 UGT2A1Q9Y4X1 527 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms